Literature DB >> 19959596

Applied conservation genetics and the need for quality control and reporting of genetic data used in fisheries and wildlife management.

Phillip A Morin1, Karen K Martien, Frederick I Archer, Frank Cipriano, Debbie Steel, Jennifer Jackson, Barbara L Taylor.   

Abstract

Genetic data are often critical for defining populations for management purposes (e.g., identifying geographic boundaries or diagnostic characters for genetically discrete subunits) but can be called into question by both scientific and legal review. This can result in reversed or delayed implementation of management actions. We discuss methods for data quality control and quality analysis and describe examples of steps applied to 2 of the most common types of genetic data, mitochondrial DNA sequences, and microsatellite genotypes. These steps can serve both as guides to conservation geneticists and as an initial protocol for managers to determine whether genetic data will hold up against legal and scientific challenges. In addition, we suggest types of data and quality measures that should be reported as supplementary materials to published reports. These supplementary data serve to reduce the occurrence of legal and conservation controversies and improve reproducibility over time in population genetics studies where genetic monitoring is likely to play an increasing role.

Mesh:

Year:  2010        PMID: 19959596     DOI: 10.1093/jhered/esp107

Source DB:  PubMed          Journal:  J Hered        ISSN: 0022-1503            Impact factor:   2.645


  8 in total

1.  Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species.

Authors:  Phillip A Morin; Frederick I Archer; Andrew D Foote; Julia Vilstrup; Eric E Allen; Paul Wade; John Durban; Kim Parsons; Robert Pitman; Lewyn Li; Pascal Bouffard; Sandra C Abel Nielsen; Morten Rasmussen; Eske Willerslev; M Thomas P Gilbert; Timothy Harkins
Journal:  Genome Res       Date:  2010-04-22       Impact factor: 9.043

2.  Rapid development of 36 polymorphic microsatellite markers for Tetranychus truncatus by transferring from Tetranychus urticae.

Authors:  Cheng Ge; Jing-Tao Sun; Yu-Nan Cui; Xiao-Yue Hong
Journal:  Exp Appl Acarol       Date:  2013-03-09       Impact factor: 2.132

3.  First Direct Evidence for Natal Wintering Ground Fidelity and Estimate of Juvenile Survival in the New Zealand Southern Right Whale Eubalaena australis.

Authors:  E L Carroll; R M Fewster; S J Childerhouse; N J Patenaude; L Boren; C S Baker
Journal:  PLoS One       Date:  2016-01-11       Impact factor: 3.240

4.  Reintroduction of the European Capercaillie from the Capercaillie Breeding Centre in Wisła Forest District: Genetic Assessments of Captive and Reintroduced Populations.

Authors:  Tomasz Strzała; Artur Kowalczyk; Ewa Łukaszewicz
Journal:  PLoS One       Date:  2015-12-18       Impact factor: 3.240

5.  Disentangling genetic structure for genetic monitoring of complex populations.

Authors:  Brook G Milligan; Frederick I Archer; Anne-Laure Ferchaud; Brian K Hand; Elizabeth M Kierepka; Robin S Waples
Journal:  Evol Appl       Date:  2018-03-23       Impact factor: 5.183

6.  Genetic and genomic monitoring with minimally invasive sampling methods.

Authors:  Emma L Carroll; Mike W Bruford; J Andrew DeWoody; Gregoire Leroy; Alan Strand; Lisette Waits; Jinliang Wang
Journal:  Evol Appl       Date:  2018-03-24       Impact factor: 5.183

7.  Preserving avian blood and DNA sampled in the wild: A survey of personal experiences.

Authors:  Irene Di Lecce; Joanna Sudyka; David F Westneat; Marta Szulkin
Journal:  Ecol Evol       Date:  2022-08-29       Impact factor: 3.167

8.  Pleistocene-Holocene vicariance, not Anthropocene landscape change, explains the genetic structure of American black bear (Ursus americanus) populations in the American Southwest and northern Mexico.

Authors:  Matthew J Gould; James W Cain; Todd C Atwood; Larisa E Harding; Heather E Johnson; Dave P Onorato; Frederic S Winslow; Gary W Roemer
Journal:  Ecol Evol       Date:  2022-10-10       Impact factor: 3.167

  8 in total

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