Literature DB >> 19958990

DNA-array of gene variants in venous leg ulcers: detection of prognostic indicators.

Donato Gemmati1, Federica Federici, Linda Catozzi, Sergio Gianesini, Giovanna Tacconi, Gian L Scapoli, Paolo Zamboni.   

Abstract

OBJECTIVE: Wound healing in venous leg ulcer (VLU) is a multi-step process involving complex pathways. Scanty knowledge at molecular level hinders clinical assessment and treatment. Anomalous handling of local iron overload, as well as unbalancing in matrix metalloproteinases (MMPs) and transglutaminase, has a recognized role in VLU establishment. We selected a number of single nucleotide polymorphisms (SNPs) in candidate genes (HFE, FPN1, MMP12, and FXIII) involved in VLU to identify potentially prognostic markers by means of DNA-array technology. METHODS AND
RESULTS: The DNA-array-genotyping was assessed in 638 subjects for the following SNPs: HFE (C282Y, H63D), FPN1 (-8CG), MMP12 (-82AG) and FXIII (V34L). Of the subjects, 221 were affected by VLU (171 primary and 50 post-thrombosis), 112 by severe chronic venous disease (CVD) (CEAP, C3-C4), while 305 were matched healthy controls. The HFE and FXIII SNPs had been previously genotyped by conventional polymerase chain reaction (PCR)-methods on the same group of subjects (J Vasc Surg 2005;42:309; J Vasc Surg 2006;44:554; J Vasc Surg 2006;44:815). For the purpose of DNA-array, they were re-genotyped by means of array-techniques resulting in a 100% matching. Intergroup statistical comparisons were performed. In the risk computation, the FPN1 -8GG genotype had an overall CVD risk of 4.3 (95% CI, 1.6-12) and a VLU risk of 5.2 (95% CI, 1.9-15) virtually the same among primary VLU (4.98; 95% CI, 1.82-14.9). The MMP12-82AA genotype had a VLU risk of 1.96 (95% CI, 1.18-3.2) only in primary VLU (P = .01). In the genotype-ulcer size association studies, from a subgroup of 167 cases, we observed a smaller mean ulcer size in the MMP12 GG-genotype compared with the other genotypes (P = .001). Combining the present results with our previous published data on the same population, we suggest them to apply as tentative prognostic indicators in primary CVD.
CONCLUSION: By analyzing simultaneously selected SNPs, it might be possible to glean precious information in predicting VLU onset or in stratifying patients according to their potential to heal. Although significant, our findings must be considered preliminary and the proposed prognostic indicators considered with caution, before ulterior more extensive studies in different populations can eventually confirm the present findings.

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Year:  2009        PMID: 19958990     DOI: 10.1016/j.jvs.2009.07.103

Source DB:  PubMed          Journal:  J Vasc Surg        ISSN: 0741-5214            Impact factor:   4.268


  13 in total

1.  HFE p.C282Y gene variant is associated with varicose veins in Russian population.

Authors:  Ekaterina A Sokolova; Alexandra S Shadrina; Kseniya S Sevost'ianova; Andrey I Shevela; Evgenii Yu Soldatsky; Evgenii I Seliverstov; Marina Yu Demekhova; Oleg A Shonov; Evgenii A Ilyukhin; Mariya A Smetanina; Elena N Voronina; Igor A Zolotukhin; Maxim L Filipenko
Journal:  Clin Exp Med       Date:  2015-09-28       Impact factor: 3.984

Review 2.  Impaired wound healing: facts and hypotheses for multi-professional considerations in predictive, preventive and personalised medicine.

Authors:  Eden Avishai; Kristina Yeghiazaryan; Olga Golubnitschaja
Journal:  EPMA J       Date:  2017-03-03       Impact factor: 6.543

Review 3.  Molecular Aspects of Wound Healing and the Rise of Venous Leg Ulceration: Omics Approaches to Enhance Knowledge and Aid Diagnostic Discovery.

Authors:  Daniel A Broszczak; Elizabeth R Sydes; Daniel Wallace; Tony J Parker
Journal:  Clin Biochem Rev       Date:  2017-02

4.  Sudden sensorineural hearing loss and polymorphisms in iron homeostasis genes: new insights from a case-control study.

Authors:  Alessandro Castiglione; Andrea Ciorba; Claudia Aimoni; Elisa Orioli; Giulia Zeri; Marco Vigliano; Donato Gemmati
Journal:  Biomed Res Int       Date:  2015-02-18       Impact factor: 3.411

5.  The Active Metabolite of Warfarin (3'-Hydroxywarfarin) and Correlation with INR, Warfarin and Drug Weekly Dosage in Patients under Oral Anticoagulant Therapy: A Pharmacogenetics Study.

Authors:  Donato Gemmati; Francesco Burini; Anna Talarico; Matteo Fabbri; Cesare Bertocco; Marco Vigliano; Stefano Moratelli; Antonio Cuneo; Maria Luisa Serino; Francesco Maria Avato; Veronica Tisato; Rosa Maria Gaudio
Journal:  PLoS One       Date:  2016-09-08       Impact factor: 3.240

6.  Gene-gene interactions among coding genes of iron-homeostasis proteins and APOE-alleles in cognitive impairment diseases.

Authors:  Veronica Tisato; Giovanni Zuliani; Marco Vigliano; Giovanna Longo; Eugenia Franchini; Paola Secchiero; Giorgio Zauli; Elvezia Maria Paraboschi; Ajay Vikram Singh; Maria Luisa Serino; Beatrice Ortolani; Amedeo Zurlo; Cristina Bosi; Antonio Greco; Davide Seripa; Rosanna Asselta; Donato Gemmati
Journal:  PLoS One       Date:  2018-03-08       Impact factor: 3.240

7.  Mechanisms of Lower Extremity Vein Dysfunction in Chronic Venous Disease and Implications in Management of Varicose Veins.

Authors:  Joseph D Raffetto; Raouf A Khalil
Journal:  Vessel Plus       Date:  2021-05-29

8.  Polymorphisms in the genes coding for iron binding and transporting proteins are associated with disability, severity, and early progression in multiple sclerosis.

Authors:  Donato Gemmati; Giulia Zeri; Elisa Orioli; Francesca E De Gaetano; Fabrizio Salvi; Ilaria Bartolomei; Sandra D'Alfonso; Claudia Dall'osso; Maurizio A Leone; Ajay V Singh; Rosanna Asselta; Paolo Zamboni
Journal:  BMC Med Genet       Date:  2012-08-10       Impact factor: 2.103

9.  Epidemiology and Genetics of Venous Thromboembolism and Chronic Venous Disease.

Authors:  Richard A Baylis; Nicholas L Smith; Derek Klarin; Eri Fukaya
Journal:  Circ Res       Date:  2021-06-10       Impact factor: 23.213

Review 10.  Factor XIII Subunit A in the Skin: Applications in Diagnosis and Treatment.

Authors:  Lilla Paragh; Daniel Törőcsik
Journal:  Biomed Res Int       Date:  2017-08-15       Impact factor: 3.411

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