Literature DB >> 19956788

Alternative Modes of Binding of Recombinant Human Histone Deacetylase 8 to Colloidal Gold Nanoparticles.

Nitesh Sule1, Raushan Singh, D K Srivastava.   

Abstract

Histone deacetylases are intimately involved in the transcriptional regulation of genes, and they are high priority drug targets for cancer therapy. Due to prevalence of several sulfhydryl groups on the surface of histone deacetylase 8, we explored the possibility of its binding to colloidal gold nanoparticles by determining its potentials to inhibit the flocculation as well as retaining the enzyme activity. It was observed that although both these processes conformed to the binding affinity of the gold-histone deacetylase 8 conjugate as being equal to 15-20 nM, only 30% of the nanoparticle-bound enzyme exhibited the enzymatic activity. In the light of the structural features of histone deacetylase 8, we propose that the enzyme interacts with the gold nanoparticles via the surface exposed thiol groups, and such interaction occurs in two alternative modes. Whereas the enzyme bound via mode-1 is catalytically inactive (presumably due to the orientation of the enzyme's active site toward the gold nanoparticle surface), and it prevents the flocculation of the nanoparticles, the enzyme bound via mode-2 shows the full catalytic activity (as its active site is believed to be oriented away from the nanoparticle surface). Although the histone deacetylase 8 bound to AuNP via mode-2 exhibits the same inhibitory potency against Trichostatin A as the free enzyme, the former is more susceptible to thermal denaturation. The potential of potent interaction between gold nanoparticles and histone deacetylase 8 via alternative modes may find diagnostic and/or therapeutic applications for different forms of cancers.

Entities:  

Year:  2008        PMID: 19956788      PMCID: PMC2759753          DOI: 10.1166/jbn.2008.011

Source DB:  PubMed          Journal:  J Biomed Nanotechnol        ISSN: 1550-7033            Impact factor:   4.099


  26 in total

1.  The language of covalent histone modifications.

Authors:  B D Strahl; C D Allis
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

2.  Colloidal gold granules as markers for cell surface receptors in the scanning electron microscope.

Authors:  M Horisberger; J Rosset; H Bauer
Journal:  Experientia       Date:  1975-10-15

3.  Probing BSA binding to citrate-coated gold nanoparticles and surfaces.

Authors:  Scott H Brewer; Wilhelm R Glomm; Marcus C Johnson; Magne K Knag; Stefan Franzen
Journal:  Langmuir       Date:  2005-09-27       Impact factor: 3.882

Review 4.  Histone deacetylase inhibitors and the promise of epigenetic (and more) treatments for cancer.

Authors:  Saverio Minucci; Pier Giuseppe Pelicci
Journal:  Nat Rev Cancer       Date:  2006-01       Impact factor: 60.716

5.  Gold nanoparticles as a colorimetric sensor for protein conformational changes.

Authors:  Soonwoo Chah; Matthew R Hammond; Richard N Zare
Journal:  Chem Biol       Date:  2005-03

6.  Two-dimensional arrangement of a functional protein by cysteine-gold interaction: enzyme activity and characterization of a protein monolayer on a gold substrate.

Authors:  Y C Sasaki; K Yasuda; Y Suzuki; T Ishibashi; I Satoh; Y Fujiki; S Ishiwata
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

7.  Protein surface-assisted enhancement in the binding affinity of an inhibitor for recombinant human carbonic anhydrase-II.

Authors:  Abir L Banerjee; Michael Swanson; Bidhan C Roy; Xiao Jia; Manas K Haldar; Sanku Mallik; D K Srivastava
Journal:  J Am Chem Soc       Date:  2004-09-08       Impact factor: 15.419

8.  Crystal structure of a eukaryotic zinc-dependent histone deacetylase, human HDAC8, complexed with a hydroxamic acid inhibitor.

Authors:  Alessandro Vannini; Cinzia Volpari; Gessica Filocamo; Elena Caroli Casavola; Mirko Brunetti; Debora Renzoni; Prasun Chakravarty; Chantal Paolini; Raffaele De Francesco; Paola Gallinari; Christian Steinkühler; Stefania Di Marco
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-11       Impact factor: 11.205

9.  Molecular evolution of the histone deacetylase family: functional implications of phylogenetic analysis.

Authors:  Ivan V Gregoretti; Yun-Mi Lee; Holly V Goodson
Journal:  J Mol Biol       Date:  2004-04-16       Impact factor: 5.469

10.  Expression profile of class I histone deacetylases in human cancer tissues.

Authors:  Masamune Nakagawa; Yoshinao Oda; Takashi Eguchi; Shin-Ichi Aishima; Takashi Yao; Fumihito Hosoi; Yuji Basaki; Mayumi Ono; Michihiko Kuwano; Masao Tanaka; Masazumi Tsuneyoshi
Journal:  Oncol Rep       Date:  2007-10       Impact factor: 3.906

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  3 in total

Review 1.  Epigenetic Aspects of Engineered Nanomaterials: Is the Collateral Damage Inevitable?

Authors:  Mallikarjuna Rao Gedda; Piyoosh Kumar Babele; Kulsoom Zahra; Prasoon Madhukar
Journal:  Front Bioeng Biotechnol       Date:  2019-09-20

Review 2.  Cellular targets and mechanisms in the cytotoxic action of non-biodegradable engineered nanoparticles.

Authors:  Eleonore Fröhlich
Journal:  Curr Drug Metab       Date:  2013-11       Impact factor: 3.731

Review 3.  Role of omics techniques in the toxicity testing of nanoparticles.

Authors:  Eleonore Fröhlich
Journal:  J Nanobiotechnology       Date:  2017-11-21       Impact factor: 10.435

  3 in total

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