Literature DB >> 1995328

B-Z DNA reversible conformation changes effected by high pressure.

A Krzyzaniak1, P Sałański, J Jurczak, J Barciszewski.   

Abstract

There are numerous data showing that a DNA molecule with alternate pirymidine-purine sequence can adopt a left-handed, double-helical Z-DNA conformation. Such structural changes of DNA occur as a consequence of environmental conditions (e.g. 4 M NaCl) or chemical modification (e.g. methylation or bromination of bases). In this paper, we found for the first time that high pressure (several kilobars) can change the DNA conformation from the B to the Z form. When the pressure is reduced to an atmospheric one, DNA conformation returns back to the B-form. The Z-DNA structure formation was confirmed by circular dichroism (CD) and ultraviolet (UV) measurements. However, we found, that the values of the ratio of absorbance at the wavelengths 295 and 257 nm in the range of 0.3-0.4 is not a fully conclusive proof for the Z-DNA conformation. Although the ratio is typical for Z-DNA form, it is not obvious that the negative band in CD spectrum will be observed. On the other hand, methylated DNA does not undergo B----Z DNA transitions at the high pressure. These conformational changes of DNA molecules could be interpreted as the effect a of different hydration of various DNA forms.

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Year:  1991        PMID: 1995328     DOI: 10.1016/0014-5793(91)80235-u

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  4 in total

1.  Effect of high hydrostatic pressure on hydration and activity of ribozymes.

Authors:  Małgorzata Giel-Pietraszuk; Agnieszka Fedoruk-Wyszomirska; Jan Barciszewski
Journal:  Mol Biol Rep       Date:  2010-03-04       Impact factor: 2.316

2.  Sulfonated Ni(II)porphyrin improves the detection of Z-DNA in condensed and non-condensed BZB DNA sequences.

Authors:  Andrea E Holmes; Jung Kyu Choi; Jacob Francis; Alessandro D'Urso; Milan Balaz
Journal:  J Inorg Biochem       Date:  2012-02-09       Impact factor: 4.155

3.  Composite cylinder models of DNA: application to the electrostatics of the B-Z transition.

Authors:  J P Demaret; M Guéron
Journal:  Biophys J       Date:  1993-10       Impact factor: 4.033

4.  Global mapping of nucleic acid conformational space: dinucleoside monophosphate conformations and transition pathways among conformational classes.

Authors:  Gregory E Sims; Sung-Hou Kim
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

  4 in total

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