Literature DB >> 19951686

Separating stem cells by flow cytometry: reducing variability for solid tissues.

Caroline M Alexander1, Joel Puchalski, Kristine S Klos, Nisha Badders, Laurie Ailles, Carla F Kim, Peter Dirks, Matthew J Smalley.   

Abstract

Until there are valid identifiers that visualize stem cells in vivo, we rely upon flow cytometry to enrich for subpopulations with stem cell function. However, data reporting styles for flow cytometric analyses are typically inconsistent, creating challenges in comparing results across publications. In our view, clear reporting guidelines could improve reproducibility of stem cell analyses in solid tissues.

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Year:  2009        PMID: 19951686      PMCID: PMC3076188          DOI: 10.1016/j.stem.2009.11.008

Source DB:  PubMed          Journal:  Cell Stem Cell        ISSN: 1875-9777            Impact factor:   24.633


  15 in total

Review 1.  Seventeen-colour flow cytometry: unravelling the immune system.

Authors:  Stephen P Perfetto; Pratip K Chattopadhyay; Mario Roederer
Journal:  Nat Rev Immunol       Date:  2004-08       Impact factor: 53.106

Review 2.  New approaches to fluorescence compensation and visualization of FACS data.

Authors:  James W Tung; David R Parks; Wayne A Moore; Leonard A Herzenberg; Leonore A Herzenberg
Journal:  Clin Immunol       Date:  2004-03       Impact factor: 3.969

3.  Generation of a functional mammary gland from a single stem cell.

Authors:  Mark Shackleton; François Vaillant; Kaylene J Simpson; John Stingl; Gordon K Smyth; Marie-Liesse Asselin-Labat; Li Wu; Geoffrey J Lindeman; Jane E Visvader
Journal:  Nature       Date:  2006-01-05       Impact factor: 49.962

4.  Guidelines for the presentation of flow cytometric data.

Authors:  Mario Roederer; Zbigniew Darzynkiewicz; David R Parks
Journal:  Methods Cell Biol       Date:  2004       Impact factor: 1.441

5.  SLAM family receptors distinguish hematopoietic stem and progenitor cells and reveal endothelial niches for stem cells.

Authors:  Mark J Kiel; Omer H Yilmaz; Toshihide Iwashita; Osman H Yilmaz; Cox Terhorst; Sean J Morrison
Journal:  Cell       Date:  2005-07-01       Impact factor: 41.582

6.  Interpreting flow cytometry data: a guide for the perplexed.

Authors:  Leonore A Herzenberg; James Tung; Wayne A Moore; Leonard A Herzenberg; David R Parks
Journal:  Nat Immunol       Date:  2006-07       Impact factor: 25.606

7.  Purification and unique properties of mammary epithelial stem cells.

Authors:  John Stingl; Peter Eirew; Ian Ricketson; Mark Shackleton; François Vaillant; David Choi; Haiyan I Li; Connie J Eaves
Journal:  Nature       Date:  2006-01-04       Impact factor: 49.962

8.  Quality assurance for polychromatic flow cytometry.

Authors:  Stephen P Perfetto; David Ambrozak; Richard Nguyen; Pratip Chattopadhyay; Mario Roederer
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

9.  How many events is enough? Are you positive?

Authors:  Mario Roederer
Journal:  Cytometry A       Date:  2008-05       Impact factor: 4.355

10.  The flow cytometry shared resource laboratory: best practices to assure a high-quality, cost-effective partnership with biomedical research laboratories.

Authors:  Jonni Moore; Mario Roederer
Journal:  Cytometry A       Date:  2009-08       Impact factor: 4.355

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  27 in total

1.  A multicenter study to standardize reporting and analyses of fluorescence-activated cell-sorted murine intestinal epithelial cells.

Authors:  Scott T Magness; Brent J Puthoff; Mary Ann Crissey; James Dunn; Susan J Henning; Courtney Houchen; John S Kaddis; Calvin J Kuo; Linheng Li; John Lynch; Martin G Martin; Randal May; Joyce C Niland; Barbara Olack; Dajun Qian; Matthias Stelzner; John R Swain; Fengchao Wang; Jiafang Wang; Xinwei Wang; Kelley Yan; Jian Yu; Melissa H Wong
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2013-08-08       Impact factor: 4.052

2.  Enrichment and characterization of cancer stem-like cells in ultra-low concentration of serum and non-adhesive culture system.

Authors:  Junfeng Zhang; Yunsheng Zhang; Lin Cheng; Chunlei Li; Lei Dai; Hui Zhang; Fenglian Yan; Hui Shi; Guanjun Dong; Zhaochen Ning; Wei Xu; Chuanping Si; Hongxin Deng; Huabao Xiong
Journal:  Am J Transl Res       Date:  2018-05-15       Impact factor: 4.060

3.  Satellite cell number and cell cycle kinetics in response to acute myotrauma in humans: immunohistochemistry versus flow cytometry.

Authors:  Bryon R McKay; Kyle G Toth; Mark A Tarnopolsky; Gianni Parise
Journal:  J Physiol       Date:  2010-07-12       Impact factor: 5.182

4.  Enrichment and characterization of human dermal stem/progenitor cells by intracellular granularity.

Authors:  Joong Hyun Shim; Tae Ryong Lee; Dong Wook Shin
Journal:  Stem Cells Dev       Date:  2013-01-22       Impact factor: 3.272

5.  Deconstructing pancreas development to reconstruct human islets from pluripotent stem cells.

Authors:  Kristen D McKnight; Pei Wang; Seung K Kim
Journal:  Cell Stem Cell       Date:  2010-04-02       Impact factor: 24.633

6.  See One, Do One, Teach One: A Practical Course on Methods in Mammary Gland Biology.

Authors:  Martin Jechlinger; Howard Kendrick; Matthew Smalley; Maria dM Vivanco
Journal:  J Mammary Gland Biol Neoplasia       Date:  2018-02-14       Impact factor: 2.673

7.  s-SHIP promoter expression marks activated stem cells in developing mouse mammary tissue.

Authors:  Lixia Bai; Larry R Rohrschneider
Journal:  Genes Dev       Date:  2010-09-01       Impact factor: 11.361

Review 8.  Pancreatic cancer stem cell biology and its therapeutic implications.

Authors:  Filip Bednar; Diane M Simeone
Journal:  J Gastroenterol       Date:  2011-11-03       Impact factor: 7.527

9.  Isolation of melanoma tumor-initiating cells from surgical tissues.

Authors:  Alexander D Boiko
Journal:  Methods Mol Biol       Date:  2013

10.  A conditional system to specifically link disruption of protein-coding function with reporter expression in mice.

Authors:  Shin-Heng Chiou; Caroline Kim-Kiselak; Viviana I Risca; Megan K Heimann; Chen-Hua Chuang; Aurora A Burds; William J Greenleaf; Tyler E Jacks; David M Feldser; Monte M Winslow
Journal:  Cell Rep       Date:  2014-06-12       Impact factor: 9.423

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