Literature DB >> 19949704

IVICAT for the masses: an improved technique for permethylation of peptides.

James G Farmar1, Heinz Nika, Fa-Yun Che, Louis Weiss, Ruth Hogue Angeletti.   

Abstract

To determine the levels of post-translational modifications, we needed a quantitative technique that would allow comparison of the amounts of acetylated versus mono-, di-, and tri-methylated lysines in histones. One method, IVICAT, generates trimethyl-amines and could be used, but is technically challenging. We have modified this technique to be used with standard laboratory equipment so that this chemistry is accessible to most proteomics laboratories.

Entities:  

Keywords:  amino groups; quantitation

Mesh:

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Year:  2009        PMID: 19949704      PMCID: PMC2777339     

Source DB:  PubMed          Journal:  J Biomol Tech        ISSN: 1524-0215


  5 in total

1.  An evaluation of the utility of in vacuo methylation for mass-spectrometry-based analyses of peptides.

Authors:  Tatiana N Laremore; David M Weber; Christin T Choma
Journal:  Rapid Commun Mass Spectrom       Date:  2005       Impact factor: 2.419

2.  In vacuo isotope coded alkylation technique (IVICAT); an N-terminal stable isotopic label for quantitative liquid chromatography/mass spectrometry proteomics.

Authors:  Brigitte L Simons; Guanghui Wang; Rong-Fong Shen; Mark A Knepper
Journal:  Rapid Commun Mass Spectrom       Date:  2006       Impact factor: 2.419

3.  Epsilon -N,N,N-trimethyllysine-specific ions in matrix-assisted laser desorption/ionization-tandem mass spectrometry.

Authors:  Junko Hirota; Yoshinori Satomi; Kazuaki Yoshikawa; Toshifumi Takao
Journal:  Rapid Commun Mass Spectrom       Date:  2003       Impact factor: 2.419

4.  Improved peptide detection with matrix-assisted laser desorption/ionization mass spectrometry by trimethylation of amino groups.

Authors:  N A Stewart; V T Pham; C T Choma; H Kaplan
Journal:  Rapid Commun Mass Spectrom       Date:  2002       Impact factor: 2.419

5.  Computational analysis and experimental validation of gene predictions in Toxoplasma gondii.

Authors:  Joseph M Dybas; Carlos J Madrid-Aliste; Fa-Yun Che; Edward Nieves; Dmitry Rykunov; Ruth Hogue Angeletti; Louis M Weiss; Kami Kim; Andras Fiser
Journal:  PLoS One       Date:  2008-12-09       Impact factor: 3.240

  5 in total
  1 in total

1.  Optimization of the β-elimination/michael addition chemistry on reversed-phase supports for mass spectrometry analysis of O-linked protein modifications.

Authors:  Heinz Nika; Edward Nieves; David H Hawke; Ruth Hogue Angeletti
Journal:  J Biomol Tech       Date:  2013-09
  1 in total

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