Literature DB >> 19948327

Genetic variability of the SNPforID 52-plex identification-SNP panel in Central West Colombia.

L Porras1, C Phillips, M Fondevila, L Beltrán, T Ortiz, F Rondon, G Barreto, M V Lareu, J Henao, A Carracedo.   

Abstract

A set of autosomal single nucleotide polymorphism (SNP) loci was analyzed using the 52-plex assay previously described by Sanchez et al. [J.J. Sanchez, C. Phillips, C. Borsting, K. Balogh, M. Bogus, M. Fondevila, C.D. Harrison, E. Musgrave-Brown, A. Salas, D. Syndercombe-Court, P.M. Schneider, A. Carracedo, N. Morling, A multiplex assay with 52 single nucleotide polymorphisms for human identification, Electrophoresis 27 (2006) 1713-1724] in 140 samples of unrelated individuals born in the Colombian regions of, Risaralda, Caldas, Quindio, Antioquia, Tolima and Valle, and 164 samples of unrelated individuals with declared Native American ancestry from Colombia. Allele frequencies and statistical parameters of forensic interest are presented for the 52 SNPs. All loci were in agreement with Hardy-Weinberg equilibrium while comparisons with population samples of Argentina, Portugal, Spain, Mozambique, and Taiwan revealed significant differences in allele frequency distributions.

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Year:  2009        PMID: 19948327     DOI: 10.1016/j.fsigen.2008.12.003

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  6 in total

1.  Kinship Analysis with Diallelic SNPs - Experiences with the SNPforID Multiplex in an ISO17025 Accreditated Laboratory.

Authors:  Claus Børsting; Martin Mikkelsen; Niels Morling
Journal:  Transfus Med Hemother       Date:  2012-05-12       Impact factor: 3.747

2.  Comparison of the genetic background of different Colombian populations using the SNPforID 52plex identification panel.

Authors:  Adriana Ibarra; Ana Freire-Aradas; Martha Martínez; Manuel Fondevila; German Burgos; Mauricio Camacho; Henry Ostos; Zuleyma Suarez; Angel Carracedo; Sidney Santos; Leonor Gusmão
Journal:  Int J Legal Med       Date:  2013-05-12       Impact factor: 2.686

3.  Validation of a cost-efficient multi-purpose SNP panel for disease based research.

Authors:  Liping Hou; Christopher Phillips; Marco Azaro; Linda M Brzustowicz; Christopher W Bartlett
Journal:  PLoS One       Date:  2011-05-17       Impact factor: 3.240

Review 4.  Interethnic admixture and the evolution of Latin American populations.

Authors:  Francisco Mauro Salzano; Mónica Sans
Journal:  Genet Mol Biol       Date:  2014-03       Impact factor: 1.771

5.  Paternal portrait of populations of the middle Magdalena River region (Tolima and Huila, Colombia): New insights on the peopling of Central America and northernmost South America.

Authors:  Luz Angela Alonso Morales; Andrea Casas-Vargas; Madelyn Rojas Castro; Rafael Resque; Ândrea Kelly Ribeiro-Dos-Santos; Sidney Santos; Leonor Gusmão; William Usaquén
Journal:  PLoS One       Date:  2018-11-15       Impact factor: 3.240

6.  Validation of 58 autosomal individual identification SNPs in three Chinese populations.

Authors:  Yi-Liang Wei; Cui-Jiao Qin; Hai-Bo Liu; Jing Jia; Lan Hu; Cai-Xia Li
Journal:  Croat Med J       Date:  2014-02       Impact factor: 1.351

  6 in total

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