Literature DB >> 19946786

Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis.

Yasunori Sasakura1, Miho M Suzuki, Akiko Hozumi, Kazuo Inaba, Nori Satoh.   

Abstract

Epigenetic regulation of genes plays a critical role in achieving proper gene expression during development, and it has been reported that epigenetic modifications are associated with transposon silencing in many organisms. Here, we report a type of epigenetic gene silencing, maternal gfp/gene silencing (MGS), in the basal chordate Ciona intestinalis. A transgenic line of Ciona, Tg[MiTFr3dTPOG]45 (abbreviated as Tg45), which was created with the Minos transposon, has a tandemly arrayed insertion of gfp in the promoter region of Ci-CesA. Progeny of Tg45 showed a reduced level of GFP expression when eggs of Tg45 were fertilized with sperm of other gfp transgenic lines. Although the genotype is the same, animals developed from Tg45 sperm and the eggs of other transgenic lines did not exhibit this phenomenon, suggesting the involvement of a maternal cytoplasmic factor that influences GFP expression. The silencing starts during oogenesis and continues after fertilization without any tissue specificity. We found that post-transcriptional degradation of the gfp mRNA is involved in MGS.

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Year:  2009        PMID: 19946786     DOI: 10.1007/s00438-009-0500-4

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  32 in total

1.  Minos, a new transposable element from Drosophila hydei, is a member of the Tc1-like family of transposons.

Authors:  G Franz; C Savakis
Journal:  Nucleic Acids Res       Date:  1991-12-11       Impact factor: 16.971

2.  Enhancer detection in the ascidian Ciona intestinalis with transposase-expressing lines of Minos.

Authors:  Yasunori Sasakura; Aru Konno; Katsutoshi Mizuno; Nori Satoh; Kazuo Inaba
Journal:  Dev Dyn       Date:  2008-01       Impact factor: 3.780

3.  CpG methylation is targeted to transcription units in an invertebrate genome.

Authors:  Miho M Suzuki; Alastair R W Kerr; Dina De Sousa; Adrian Bird
Journal:  Genome Res       Date:  2007-04-09       Impact factor: 9.043

4.  Comprehensive egg coat proteome of the ascidian Ciona intestinalis reveals gamete recognition molecules involved in self-sterility.

Authors:  Lixy Yamada; Takako Saito; Hisaaki Taniguchi; Hitoshi Sawada; Yoshito Harada
Journal:  J Biol Chem       Date:  2009-02-03       Impact factor: 5.157

5.  Mobility assays confirm the broad host-range activity of the Minos transposable element and validate new transformation tools.

Authors:  A G Klinakis; T G Loukeris; A Pavlopoulos; C Savakis
Journal:  Insect Mol Biol       Date:  2000-06       Impact factor: 3.585

6.  Computational discovery of DNA motifs associated with cell type-specific gene expression in Ciona.

Authors:  Takehiro Kusakabe; Reiko Yoshida; Yoko Ikeda; Motoyuki Tsuda
Journal:  Dev Biol       Date:  2004-12-15       Impact factor: 3.582

7.  Application of Minos, one of the Tc1/mariner superfamily transposable elements, to ascidian embryos as a tool for insertional mutagenesis.

Authors:  Yasunori Sasakura; Satoko Awazu; Shota Chiba; Shungo Kano; Nori Satoh
Journal:  Gene       Date:  2003-04-10       Impact factor: 3.688

8.  Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans.

Authors:  C. Napoli; C. Lemieux; R. Jorgensen
Journal:  Plant Cell       Date:  1990-04       Impact factor: 11.277

9.  The evolutionary origin of animal cellulose synthase.

Authors:  Keisuke Nakashima; Lixy Yamada; Yutaka Satou; Jun-Ichi Azuma; Nori Satoh
Journal:  Dev Genes Evol       Date:  2004-01-22       Impact factor: 0.900

Review 10.  Germline transgenesis and insertional mutagenesis in the ascidian Ciona intestinalis.

Authors:  Yasunori Sasakura
Journal:  Dev Dyn       Date:  2007-07       Impact factor: 3.780

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  11 in total

1.  Tissue-specific genome editing in Ciona embryos by CRISPR/Cas9.

Authors:  Alberto Stolfi; Shashank Gandhi; Farhana Salek; Lionel Christiaen
Journal:  Development       Date:  2014-11       Impact factor: 6.868

2.  Evaluation and rational design of guide RNAs for efficient CRISPR/Cas9-mediated mutagenesis in Ciona.

Authors:  Shashank Gandhi; Maximilian Haeussler; Florian Razy-Krajka; Lionel Christiaen; Alberto Stolfi
Journal:  Dev Biol       Date:  2017-03-22       Impact factor: 3.582

3.  Vasopressin Promoter Transgenic and Vasopressin Gene-Edited Ascidian, Ciona intestinalis Type A (Ciona robusta): Innervation, Gene Expression Profiles, and Phenotypes.

Authors:  Tsuyoshi Kawada; Akira Shiraishi; Shin Matsubara; Akiko Hozumi; Takeo Horie; Yasunori Sasakura; Honoo Satake
Journal:  Front Endocrinol (Lausanne)       Date:  2021-05-06       Impact factor: 5.555

4.  Transposon-mediated targeted and specific knockdown of maternally expressed transcripts in the ascidian Ciona intestinalis.

Authors:  Takako Iitsuka; Kaoru Mita; Akiko Hozumi; Mayuko Hamada; Nori Satoh; Yasunori Sasakura
Journal:  Sci Rep       Date:  2014-05-23       Impact factor: 4.379

5.  piRNA-like small RNAs are responsible for the maternal-specific knockdown in the ascidian Ciona intestinalis Type A.

Authors:  Teruki Satoh; Takako Iitsuka; Akira Shiraishi; Akiko Hozumi; Honoo Satake; Yasunori Sasakura
Journal:  Sci Rep       Date:  2018-04-12       Impact factor: 4.379

6.  Mesmerize is a dynamically adaptable user-friendly analysis platform for 2D and 3D calcium imaging data.

Authors:  Jordi Cornelis Zwiggelaar; Jørgen Høyer; Kushal Kolar; Daniel Dondorp; Marios Chatzigeorgiou
Journal:  Nat Commun       Date:  2021-11-12       Impact factor: 14.919

7.  A Basal chordate model for studies of gut microbial immune interactions.

Authors:  Larry J Dishaw; Jaime A Flores-Torres; M Gail Mueller; Charlotte R Karrer; Diana P Skapura; Daniela Melillo; Ivana Zucchetti; Rosaria De Santis; Maria Rosaria Pinto; Gary W Litman
Journal:  Front Immunol       Date:  2012-05-03       Impact factor: 7.561

8.  Identical sets of methylated and nonmethylated genes in Ciona intestinalis sperm and muscle cells.

Authors:  Miho M Suzuki; Akiko Yoshinari; Madoka Obara; Shohei Takuno; Shuji Shigenobu; Yasunori Sasakura; Alastair Rw Kerr; Shaun Webb; Adrian Bird; Atsuo Nakayama
Journal:  Epigenetics Chromatin       Date:  2013-11-11       Impact factor: 4.954

9.  CRISPR/Cas9-mediated gene knockout in the ascidian Ciona intestinalis.

Authors:  Haruka Sasaki; Keita Yoshida; Akiko Hozumi; Yasunori Sasakura
Journal:  Dev Growth Differ       Date:  2014-09-12       Impact factor: 2.053

10.  d-Serine controls epidermal vesicle release via NMDA receptor, allowing tissue migration during the metamorphosis of the chordate Ciona.

Authors:  Gabriel Krasovec; Akiko Hozumi; Tomoyuki Yoshida; Takayuki Obita; Mayuko Hamada; Akira Shiraishi; Honoo Satake; Takeo Horie; Hisashi Mori; Yasunori Sasakura
Journal:  Sci Adv       Date:  2022-03-11       Impact factor: 14.136

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