Literature DB >> 19946353

Mechanistic studies in the synthesis of a series of thieno-expanded xanthosine and guanosine nucleosides.

Zhibo Zhang1, Orrette R Wauchope, Katherine L Seley-Radtke.   

Abstract

During the synthetic pursuit of guanosine (n class="Chemical">triG) and xanthosine (triX) tricyclic nucleosides analogues, an interesting side product was discovered. In an effort to uncover the mechanistic factors leading to this result, a series of reaction conditions were investigated. It was found that by varying the conditions, the appearance of the side product could be controlled. In addition, the yield of the desired products could be manipulated to afford either a 50:50 mix of both triG and triX, or a majority of one or the other. To demonstrate the broad utility of the method, it was also adapted to the synthesis of guanosine and xanthosine from 5-amino-1-beta-D-ribofuranosyl-4-imidazolecarboxyamide (AICAR). The mechanistic details surrounding the synthetic efforts are reported herein.

Entities:  

Year:  2008        PMID: 19946353      PMCID: PMC2629406          DOI: 10.1016/j.tet.2008.09.011

Source DB:  PubMed          Journal:  Tetrahedron        ISSN: 0040-4020            Impact factor:   2.457


  43 in total

1.  Efforts toward expansion of the genetic alphabet: replication of DNA with three base pairs.

Authors:  E L Tae; Y Wu; G Xia; P G Schultz; F E Romesberg
Journal:  J Am Chem Soc       Date:  2001-08-01       Impact factor: 15.419

2.  "Fleximers". Design and synthesis of two novel split nucleosides.

Authors:  K L Seley; L Zhang; A Hagos
Journal:  Org Lett       Date:  2001-10-04       Impact factor: 6.005

3.  Polymerase recognition of unnatural base pairs.

Authors:  Chengzhi Yu; Allison A Henry; Floyd E Romesberg; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2002-10-18       Impact factor: 15.336

4.  A stable DNA duplex containing a non-hydrogen-bonding and non-shape-complementary base couple: interstrand stacking as the stability determining factor.

Authors:  C Brotschi; A Häberli; C J Leumann
Journal:  Angew Chem Int Ed Engl       Date:  2001       Impact factor: 15.336

5.  Dimensional probes of the enzyme binding sites of adenine nucleotides. Biological effects of widening the adenine ring by 2.4 A.

Authors:  N J Leonard; D I Scopes; P VanDerLijn; J R Barrio
Journal:  Biochemistry       Date:  1978-09-05       Impact factor: 3.162

6.  Substrate discrimination by the human GTP fucose pyrophosphorylase.

Authors:  Stephen Quirk; Katherine L Seley
Journal:  Biochemistry       Date:  2005-08-16       Impact factor: 3.162

7.  Synthesis and antiviral activity of some acyclic and C-acyclic pyrrolo[2,3-d]pyrimidine nucleoside analogues.

Authors:  S M Bennett; N Nguyen-Ba; K K Ogilvie
Journal:  J Med Chem       Date:  1990-08       Impact factor: 7.446

8.  Synthesis of certain [6:5:6] linear tricyclic nucleosides as potential antitumor agents.

Authors:  F L Chung; K H Schram; R P Panzica; R A Earl; L L Wotring; L B Townsend
Journal:  J Med Chem       Date:  1980-11       Impact factor: 7.446

9.  Carbocyclic isoadenosine analogues of neplanocin A.

Authors:  Katherine L Seley; Sylvester L Mosley; Fanxing Zeng
Journal:  Org Lett       Date:  2003-11-13       Impact factor: 6.005

10.  Toward a new genetic system with expanded dimensions: size-expanded analogues of deoxyadenosine and thymidine.

Authors:  Haibo Liu; Jianmin Gao; Lystranne Maynard; Y David Saito; Eric T Kool
Journal:  J Am Chem Soc       Date:  2004-02-04       Impact factor: 15.419

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  9 in total

1.  Thiophene-expanded guanosine analogues of Gemcitabine.

Authors:  Zhe Chen; Therese C Ku; Katherine L Seley-Radtke
Journal:  Bioorg Med Chem Lett       Date:  2015-07-30       Impact factor: 2.823

2.  Antiproliferative activities of halogenated thieno[3,2-d]pyrimidines.

Authors:  Kartik W Temburnikar; Sarah C Zimmermann; Nathaniel T Kim; Christina R Ross; Christopher Gelbmann; Christine E Salomon; Gerald M Wilson; Jan Balzarini; Katherine L Seley-Radtke
Journal:  Bioorg Med Chem       Date:  2014-03-03       Impact factor: 3.641

3.  Antiproliferative activities of halogenated pyrrolo[3,2-d]pyrimidines.

Authors:  Kartik W Temburnikar; Christina R Ross; Gerald M Wilson; Jan Balzarini; Brian M Cawrse; Katherine L Seley-Radtke
Journal:  Bioorg Med Chem       Date:  2015-06-16       Impact factor: 3.641

4.  Synthesis and biological evaluation of a series of thieno-expanded tricyclic purine 2'-deoxy nucleoside analogues.

Authors:  Orrette R Wauchope; Cameron Johnson; Pasupathy Krishnamoorthy; Graciela Andrei; Robert Snoeck; Jan Balzarini; Katherine L Seley-Radtke
Journal:  Bioorg Med Chem       Date:  2012-03-12       Impact factor: 3.641

5.  Tricyclic 2'-C-modified nucleosides as potential anti-HCV therapeutics.

Authors:  Orrette R Wauchope; Matthew J Tomney; Joseph L Pepper; Brent E Korba; Katherine L Seley-Radtke
Journal:  Org Lett       Date:  2010-10-15       Impact factor: 6.005

Review 6.  The evolution of nucleoside analogue antivirals: A review for chemists and non-chemists. Part 1: Early structural modifications to the nucleoside scaffold.

Authors:  Katherine L Seley-Radtke; Mary K Yates
Journal:  Antiviral Res       Date:  2018-04-10       Impact factor: 10.103

7.  Probing the Effects of Pyrimidine Functional Group Switches on Acyclic Fleximer Analogues for Antiviral Activity.

Authors:  Mary K Yates; Payel Chatterjee; Mike Flint; Yafet Arefeayne; Damjan Makuc; Janez Plavec; Christina F Spiropoulou; Katherine L Seley-Radtke
Journal:  Molecules       Date:  2019-09-02       Impact factor: 4.411

8.  Formal (4+1) cycloaddition of methylenecyclopropanes with 7-aryl-1,3,5-cycloheptatrienes by triple gold(I) catalysis.

Authors:  Yahui Wang; Michael E Muratore; Zhouting Rong; Antonio M Echavarren
Journal:  Angew Chem Int Ed Engl       Date:  2014-06-04       Impact factor: 15.336

9.  An Expedient Synthesis of Flexible Nucleosides through Enzymatic Glycosylation of Proximal and Distal Fleximer Bases.

Authors:  Sophie Vichier-Guerre; Therese C Ku; Sylvie Pochet; Katherine L Seley-Radtke
Journal:  Chembiochem       Date:  2020-02-27       Impact factor: 3.461

  9 in total

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