Literature DB >> 19941860

The balance between pre- and post-transfer editing in tRNA synthetases.

Susan A Martinis1, Michal T Boniecki.   

Abstract

The fidelity of tRNA aminoacylation is dependent in part on amino acid editing mechanisms. A hydrolytic activity that clears mischarged tRNAs typically resides in an active site on the tRNA synthetase that is distinct from its synthetic aminoacylation active site. A second pre-transfer editing pathway that hydrolyzes the tRNA synthetase aminoacyl adenylate intermediate can also be activated. Pre- and post-transfer editing activities can co-exist within a single tRNA synthetase resulting in a redundancy of fidelity mechanisms. However, in most cases one pathway appears to dominate, but when compromised, the secondary pathway can be activated to suppress tRNA synthetase infidelities.

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Year:  2010        PMID: 19941860      PMCID: PMC2859721          DOI: 10.1016/j.febslet.2009.11.071

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  49 in total

1.  MECHANISM OF AMINOACYL RNA SYNTHESIS: STUDIES WITH ISOLATED AMINOACYL ADENYLATE COMPLEXES OF ISOLEUCYL RNA SYNTHETASE.

Authors:  A T NORRIS; P BERG
Journal:  Proc Natl Acad Sci U S A       Date:  1964-08       Impact factor: 11.205

2.  THE FREQUENCY OF ERRORS IN PROTEIN BIOSYNTHESIS.

Authors:  R B LOFTFIELD
Journal:  Biochem J       Date:  1963-10       Impact factor: 3.857

3.  Enzymatic carboxyl activation of amino acids.

Authors:  M B HOAGLAND; E B KELLER; P C ZAMECNIK
Journal:  J Biol Chem       Date:  1956-01       Impact factor: 5.157

4.  The crystal structure of leucyl-tRNA synthetase complexed with tRNALeu in the post-transfer-editing conformation.

Authors:  Michael Tukalo; Anna Yaremchuk; Ryuya Fukunaga; Shigeyuki Yokoyama; Stephen Cusack
Journal:  Nat Struct Mol Biol       Date:  2005-09-11       Impact factor: 15.369

5.  Mutational unmasking of a tRNA-dependent pathway for preventing genetic code ambiguity.

Authors:  Amy M Williams; Susan A Martinis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

6.  An aminoacyl-tRNA synthetase with a defunct editing site.

Authors:  Stanley W Lue; Shana O Kelley
Journal:  Biochemistry       Date:  2005-03-01       Impact factor: 3.162

7.  The bacterial YbaK protein is a Cys-tRNAPro and Cys-tRNA Cys deacylase.

Authors:  Benfang Ruan; Dieter Söll
Journal:  J Biol Chem       Date:  2005-05-10       Impact factor: 5.157

8.  tRNA-dependent aminoacyl-adenylate hydrolysis by a nonediting class I aminoacyl-tRNA synthetase.

Authors:  Ita Gruic-Sovulj; Nathan Uter; Timothy Bullock; John J Perona
Journal:  J Biol Chem       Date:  2005-04-20       Impact factor: 5.157

9.  Loss of editing activity during the evolution of mitochondrial phenylalanyl-tRNA synthetase.

Authors:  Hervé Roy; Jiqiang Ling; Juan Alfonzo; Michael Ibba
Journal:  J Biol Chem       Date:  2005-09-14       Impact factor: 5.157

10.  Achieving error-free translation; the mechanism of proofreading of threonyl-tRNA synthetase at atomic resolution.

Authors:  Anne-Catherine Dock-Bregeon; Bernard Rees; Alfredo Torres-Larios; Gilbert Bey; Joel Caillet; Dino Moras
Journal:  Mol Cell       Date:  2004-11-05       Impact factor: 17.970

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  36 in total

Review 1.  Aminoacyl-tRNA synthetases and tumorigenesis: more than housekeeping.

Authors:  Sunghoon Kim; Sungyong You; Daehee Hwang
Journal:  Nat Rev Cancer       Date:  2011-09-23       Impact factor: 60.716

Review 2.  Cellular mechanisms that control mistranslation.

Authors:  Noah M Reynolds; Beth A Lazazzera; Michael Ibba
Journal:  Nat Rev Microbiol       Date:  2010-12       Impact factor: 60.633

3.  Aminoacylation of tRNA 2'- or 3'-hydroxyl by phosphoseryl- and pyrrolysyl-tRNA synthetases.

Authors:  Markus Englert; Sarath Moses; Michael Hohn; Jiqiang Ling; Patrick O'Donoghue; Dieter Söll
Journal:  FEBS Lett       Date:  2013-09-08       Impact factor: 4.124

4.  p23H implicated as cis/trans regulator of AlaXp-directed editing for mammalian cell homeostasis.

Authors:  Mir Hussain Nawaz; Eve Merriman; Xiang-Lei Yang; Paul Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-01       Impact factor: 11.205

5.  Misacylation of specific nonmethionyl tRNAs by a bacterial methionyl-tRNA synthetase.

Authors:  Thomas E Jones; Rebecca W Alexander; Tao Pan
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

6.  Naturally occurring aminoacyl-tRNA synthetases editing-domain mutations that cause mistranslation in Mycoplasma parasites.

Authors:  Li Li; Michal T Boniecki; Jacob D Jaffe; Brian S Imai; Peter M Yau; Zaida A Luthey-Schulten; Susan A Martinis
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-23       Impact factor: 11.205

7.  Leucyl-tRNA synthetase editing domain functions as a molecular rheostat to control codon ambiguity in Mycoplasma pathogens.

Authors:  Li Li; Andrés Palencia; Tiit Lukk; Zhi Li; Zaida A Luthey-Schulten; Stephen Cusack; Susan A Martinis; Michal T Boniecki
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

8.  p53-Dependent DNA damage response sensitive to editing-defective tRNA synthetase in zebrafish.

Authors:  Youngzee Song; Yi Shi; Tristan M Carland; Shanshan Lian; Tomoyuki Sasaki; Nicholas J Schork; Steven R Head; Shuji Kishi; Paul Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-08       Impact factor: 11.205

9.  Homologous trans-editing factors with broad tRNA specificity prevent mistranslation caused by serine/threonine misactivation.

Authors:  Ziwei Liu; Oscar Vargas-Rodriguez; Yuki Goto; Eva Maria Novoa; Lluís Ribas de Pouplana; Hiroaki Suga; Karin Musier-Forsyth
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

10.  Do anticodons of misacylated tRNAs preferentially mismatch codons coding for the misloaded amino acid?

Authors:  Hervé Seligmann
Journal:  BMC Mol Biol       Date:  2010-05-28       Impact factor: 2.946

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