Literature DB >> 19935661

Ureide catabolism in Arabidopsis thaliana and Escherichia coli.

Andrea K Werner1, Tina Romeis, Claus-Peter Witte.   

Abstract

The availability of whole genome sequences boosts the identification of biochemical pathways conserved across species using tools of comparative genomics. A cross-organism protein association analysis allowed us to identify two enzymes, ureidoglycine aminohydrolase and ureidoglycolate amidohydrolase, that catalyze the final reactions of purine degradation in the model plant Arabidopsis thaliana. A similar pathway was found in Escherichia coli, while an alternative metabolic route via ureidoglycine transaminase can be predicted for other organisms.

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Year:  2009        PMID： 19935661     DOI： 10.1038/nchembio.265

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN： 1552-4450            Impact factor:   15.040


  17 in total

1.  Isolation of a chromosomal region of Klebsiella pneumoniae associated with allantoin metabolism and liver infection.

Authors:  Huei-Chi Chou; Cha-Ze Lee; Li-Chen Ma; Chi-Tai Fang; Shan-Chwen Chang; Jin-Town Wang
Journal:  Infect Immun       Date:  2004-07       Impact factor: 3.441

2.  MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs and amino acid composition.

Authors:  Annette Höglund; Pierre Dönnes; Torsten Blum; Hans-Werner Adolph; Oliver Kohlbacher
Journal:  Bioinformatics       Date:  2006-01-20       Impact factor: 6.937

3.  Urea is a product of ureidoglycolate degradation in chickpea. Purification and characterization of the ureidoglycolate urea-lyase.

Authors:  A Muñoz; P Piedras; M Aguilar; M Pineda
Journal:  Plant Physiol       Date:  2001-02       Impact factor: 8.340

4.  Hydrolysis, racemization and absolute configuration of ureidoglycolate, a substrate of allantoicase.

Authors:  E J Gravenmade; G D Vogels; C Van der Drift
Journal:  Biochim Biophys Acta       Date:  1970-03-18

5.  Allantoate hydrolysis by allantoate amidohydrolase.

Authors:  C van der Drift; F E de Windt; G D Vogels
Journal:  Arch Biochem Biophys       Date:  1970-01       Impact factor: 4.013

6.  Ureide Catabolism in Soybeans : III. Ureidoglycolate Amidohydrolase and Allantoate Amidohydrolase Are Activities of an Allantoate Degrading Enzyme Complex.

Authors:  R G Winkler; D G Blevins; D D Randall
Journal:  Plant Physiol       Date:  1988-04       Impact factor: 8.340

Review 7.  Update on ureide degradation in legumes.

Authors:  Christopher D Todd; Peter A Tipton; Dale G Blevins; Pedro Piedras; Manuel Pineda; Joe C Polacco
Journal:  J Exp Bot       Date:  2005-11-29       Impact factor: 6.992

8.  Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.

Authors:  E Cusa; N Obradors; L Baldomà; J Badía; J Aguilar
Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

9.  Functional analysis of 14 genes that constitute the purine catabolic pathway in Bacillus subtilis and evidence for a novel regulon controlled by the PucR transcription activator.

Authors:  A C Schultz; P Nygaard; H H Saxild
Journal:  J Bacteriol       Date:  2001-06       Impact factor: 3.490

Review 10.  Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen.

Authors:  Wolf-Rüdiger Scheible; Rosa Morcuende; Tomasz Czechowski; Christina Fritz; Daniel Osuna; Natalia Palacios-Rojas; Dana Schindelasch; Oliver Thimm; Michael K Udvardi; Mark Stitt
Journal:  Plant Physiol       Date:  2004-09       Impact factor: 8.340
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  38 in total

1.  Comparison of inhibition of N2 fixation and ureide accumulation under water deficit in four common bean genotypes of contrasting drought tolerance.

Authors:  I Coleto; M Pineda; A P Rodiño; A M De Ron; J M Alamillo
Journal:  Ann Bot       Date:  2014-03-16       Impact factor: 4.357

2.  Early Senescence in Older Leaves of Low Nitrate-Grown Atxdh1 Uncovers a Role for Purine Catabolism in N Supply.

Authors:  Aigerim Soltabayeva; Sudhakar Srivastava; Assylay Kurmanbayeva; Aizat Bekturova; Robert Fluhr; Moshe Sagi
Journal:  Plant Physiol       Date:  2018-09-06       Impact factor: 8.340

3.  Biochemical and structural characterization of Klebsiella pneumoniae oxamate amidohydrolase in the uric acid degradation pathway.

Authors:  Katherine A Hicks; Steven E Ealick
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-05-25       Impact factor: 7.652

4.  Nucleotide Metabolism in Plants.

Authors:  Claus-Peter Witte; Marco Herde
Journal:  Plant Physiol       Date:  2019-10-22       Impact factor: 8.340

5.  Labellum transcriptome reveals alkene biosynthetic genes involved in orchid sexual deception and pollination-induced senescence.

Authors:  Filipa Monteiro; Mónica Sebastiana; Andreia Figueiredo; Lisete Sousa; Helena C Cotrim; Maria Salomé Pais
Journal:  Funct Integr Genomics       Date:  2012-06-17       Impact factor: 3.410

6.  2-Hydroxy Acids in Plant Metabolism.

Authors:  Veronica G Maurino; Martin K M Engqvist
Journal:  Arabidopsis Book       Date:  2015-09-04

7.  Extracellular ammonia at sites of pulmonary infection with Coccidioides posadasii contributes to severity of the respiratory disease.

Authors:  Hua Zhang Wise; Chiung-Yu Hung; Emily Whiston; John W Taylor; Garry T Cole
Journal:  Microb Pathog       Date:  2013-04-10       Impact factor: 3.738

8.  Of the Nine Cytidine Deaminase-Like Genes in Arabidopsis, Eight Are Pseudogenes and Only One Is Required to Maintain Pyrimidine Homeostasis in Vivo.

Authors:  Mingjia Chen; Marco Herde; Claus-Peter Witte
Journal:  Plant Physiol       Date:  2016-03-31       Impact factor: 8.340

9.  Allantoin accumulation mediated by allantoinase downregulation and transport by Ureide Permease 5 confers salt stress tolerance to Arabidopsis plants.

Authors:  Carlos Ignacio Lescano; Carolina Martini; Claudio Alejandro González; Marcelo Desimone
Journal:  Plant Mol Biol       Date:  2016-05-21       Impact factor: 4.076

10.  Uric acid accumulation in an Arabidopsis urate oxidase mutant impairs seedling establishment by blocking peroxisome maintenance.

Authors:  Oliver K Hauck; Jana Scharnberg; Nieves Medina Escobar; Gerhard Wanner; Patrick Giavalisco; Claus-Peter Witte
Journal:  Plant Cell       Date:  2014-07-22       Impact factor: 11.277
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