Literature DB >> 19934307

Rapid identification of clinical relevant minor histocompatibility antigens via genome-wide zygosity-genotype correlation analysis.

Robbert M Spaapen1, Ron A L de Kort, Kelly van den Oudenalder, Maureen van Elk, Andries C Bloem, Henk M Lokhorst, Tuna Mutis.   

Abstract

PURPOSE: Identification of minor histocompatibility antigens (mHag) with classic methods often requires sophisticated technologies, determination, and patience. We here describe and validate a nonlaborious and convenient genetic approach, based on genome-wide correlations of mHag zygosities with HapMap single-nucleotide polymorphism genotypes, to identify clinical relevant mHags within a reasonable time frame. EXPERIMENTAL
DESIGN: Using this approach, we sought for the mHag recognized by a HLA-DRB1*1501-restricted T-cell clone, isolated from a multiple myeloma patient during a strong graft-versus-tumor effect associated with acute graft-versus-host disease grade 3.
RESULTS: In a period of 3 months, we determined the mHag phenotype of 54 HapMap individuals, deduced the zygosity of 20 individuals, defined the mHag locus by zygosity-genotype correlation analyses, tested the putative mHag peptides from this locus, and finally showed that the mHag is encoded by the arginine (R) allele of a nonsynonymous single-nucleotide polymorphism in the SLC19A1 gene.
CONCLUSIONS: We conclude that this powerful and convenient strategy offers a broadly accessible platform toward rapid identification of mHags associated with graft-versus-tumor effect and graft-versus-host disease.

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Year:  2009        PMID: 19934307     DOI: 10.1158/1078-0432.CCR-09-1914

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  16 in total

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2.  Identification of minor histocompatibility antigens based on the 1000 Genomes Project.

Authors:  Rimke Oostvogels; Henk M Lokhorst; Monique C Minnema; Maureen van Elk; Kelly van den Oudenalder; Eric Spierings; Tuna Mutis; Robbert M Spaapen
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3.  Memory T cells from minor histocompatibility antigen-vaccinated and virus-immune donors improve GVL and immune reconstitution.

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Journal:  Blood       Date:  2011-09-13       Impact factor: 22.113

4.  Identification of 4 novel HLA-B*40:01 restricted minor histocompatibility antigens and their potential as targets for graft-versus-leukemia reactivity.

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Journal:  Haematologica       Date:  2012-03-14       Impact factor: 9.941

Review 5.  Exploiting T cells specific for human minor histocompatibility antigens for therapy of leukemia.

Authors:  Marie Bleakley; Stanley R Riddell
Journal:  Immunol Cell Biol       Date:  2011-02-08       Impact factor: 5.126

Review 6.  Allo-reactive T cells for the treatment of hematological malignancies.

Authors:  J H F Falkenburg; I Jedema
Journal:  Mol Oncol       Date:  2015-10-24       Impact factor: 6.603

7.  HapMap SNP Scanner: an online program to mine SNPs responsible for cell phenotype.

Authors:  T Yamamura; J Hikita; M Bleakley; T Hirosawa; A Sato-Otsubo; H Torikai; T Hamajima; Y Nannya; A Demachi-Okamura; E Maruya; H Saji; Y Yamamoto; T Takahashi; N Emi; Y Morishima; Y Kodera; K Kuzushima; S R Riddell; S Ogawa; Y Akatsuka
Journal:  Tissue Antigens       Date:  2012-05-08

Review 8.  Minor histocompatibility Ags: identification strategies, clinical results and translational perspectives.

Authors:  R Oostvogels; H M Lokhorst; T Mutis
Journal:  Bone Marrow Transplant       Date:  2015-10-26       Impact factor: 5.483

9.  Genome-Wide Analysis in Swine Associates Corneal Graft Rejection with Donor-Recipient Mismatches in Three Novel Histocompatibility Regions and One Locus Homologous to the Mouse H-3 Locus.

Authors:  Susan Nicholls; Ricardo Pong-Wong; Louisa Mitchard; Ross Harley; Alan Archibald; Andrew Dick; Michael Bailey
Journal:  PLoS One       Date:  2016-03-24       Impact factor: 3.240

10.  Towards effective and safe immunotherapy after allogeneic stem cell transplantation: identification of hematopoietic-specific minor histocompatibility antigen UTA2-1.

Authors:  R Oostvogels; M C Minnema; M van Elk; R M Spaapen; G D te Raa; B Giovannone; A Buijs; D van Baarle; A P Kater; M Griffioen; E Spierings; H M Lokhorst; T Mutis
Journal:  Leukemia       Date:  2012-10-01       Impact factor: 11.528

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