Literature DB >> 19926898

Convex and semi-nonnegative matrix factorizations.

Chris Ding1, Tao Li, Michael I Jordan.   

Abstract

We present several new variations on the theme of nonnegative matrix factorization (NMF). Considering factorizations of the form X=FG(T), we focus on algorithms in which G is restricted to containing nonnegative entries, but allowing the data matrix X to have mixed signs, thus extending the applicable range of NMF methods. We also consider algorithms in which the basis vectors of F are constrained to be convex combinations of the data points. This is used for a kernel extension of NMF. We provide algorithms for computing these new factorizations and we provide supporting theoretical analysis. We also analyze the relationships between our algorithms and clustering algorithms, and consider the implications for sparseness of solutions. Finally, we present experimental results that explore the properties of these new methods.

Year:  2010        PMID: 19926898     DOI: 10.1109/TPAMI.2008.277

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  49 in total

Review 1.  Methods for biological data integration: perspectives and challenges.

Authors:  Vladimir Gligorijević; Nataša Pržulj
Journal:  J R Soc Interface       Date:  2015-11-06       Impact factor: 4.118

2.  In vivo snapshot hyperspectral image analysis of age-related macular degeneration.

Authors:  N Lee; J Wielaard; A A Fawzi; P Sajda; A F Laine; G Martin; M S Humayun; R T Smith
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

3.  EEG source imaging with spatio-temporal tomographic nonnegative independent component analysis.

Authors:  Pedro A Valdés-Sosa; Mayrim Vega-Hernández; José Miguel Sánchez-Bornot; Eduardo Martínez-Montes; María Antonieta Bobes
Journal:  Hum Brain Mapp       Date:  2009-06       Impact factor: 5.038

4.  Supervised Nonnegative Matrix Factorization to Predict ICU Mortality Risk.

Authors:  Guoqing Chao; Chengsheng Mao; Fei Wang; Yuan Zhao; Yuan Luo
Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)       Date:  2019-01-24

5.  Integrating hypertension phenotype and genotype with hybrid non-negative matrix factorization.

Authors:  Yuan Luo; Chengsheng Mao; Yiben Yang; Fei Wang; Faraz S Ahmad; Donna Arnett; Marguerite R Irvin; Sanjiv J Shah
Journal:  Bioinformatics       Date:  2019-04-15       Impact factor: 6.937

6.  Conv-TasNet: Surpassing Ideal Time-Frequency Magnitude Masking for Speech Separation.

Authors:  Yi Luo; Nima Mesgarani
Journal:  IEEE/ACM Trans Audio Speech Lang Process       Date:  2019-05-06

7.  Convexity-constrained and nonnegativity-constrained spherical factorization in diffusion-weighted imaging.

Authors:  Daan Christiaens; Stefan Sunaert; Paul Suetens; Frederik Maes
Journal:  Neuroimage       Date:  2016-10-27       Impact factor: 6.556

8.  Detecting hidden batch factors through data-adaptive adjustment for biological effects.

Authors:  Haidong Yi; Ayush T Raman; Han Zhang; Genevera I Allen; Zhandong Liu
Journal:  Bioinformatics       Date:  2018-04-01       Impact factor: 6.937

9.  NITUMID: Nonnegative matrix factorization-based Immune-TUmor MIcroenvironment Deconvolution.

Authors:  Daiwei Tang; Seyoung Park; Hongyu Zhao
Journal:  Bioinformatics       Date:  2020-03-01       Impact factor: 6.937

10.  The peri-Sylvian cortical network underlying single word repetition revealed by electrocortical stimulation and direct neural recordings.

Authors:  Matthew K Leonard; Ruofan Cai; Miranda C Babiak; Angela Ren; Edward F Chang
Journal:  Brain Lang       Date:  2016-07-19       Impact factor: 2.381

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.