Literature DB >> 19925558

The gene balance hypothesis: implications for gene regulation, quantitative traits and evolution.

James A Birchler1, Reiner A Veitia.   

Abstract

The gene balance hypothesis states that the stoichiometry of members of multisubunit complexes affects the function of the whole because of the kinetics and mode of assembly. Gene regulatory mechanisms also would be governed by these principles. Here, we review the impact of this concept with regard to the effects on the genetics of quantitative traits, the fate of duplication of genes following polyploidization events or segmental duplication, the basis of aneuploid syndromes, the constraints on cis and trans variation in gene regulation and the potential involvement in hybrid incompatibilities.

Entities:  

Mesh:

Year:  2009        PMID: 19925558      PMCID: PMC2858765          DOI: 10.1111/j.1469-8137.2009.03087.x

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  89 in total

1.  Modeling gene and genome duplications in eukaryotes.

Authors:  Steven Maere; Stefanie De Bodt; Jeroen Raes; Tineke Casneuf; Marc Van Montagu; Martin Kuiper; Yves Van de Peer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-30       Impact factor: 11.205

Review 2.  The gene balance hypothesis: from classical genetics to modern genomics.

Authors:  James A Birchler; Reiner A Veitia
Journal:  Plant Cell       Date:  2007-02-09       Impact factor: 11.277

3.  Multiple paleopolyploidizations during the evolution of the Compositae reveal parallel patterns of duplicate gene retention after millions of years.

Authors:  Michael S Barker; Nolan C Kane; Marta Matvienko; Alexander Kozik; Richard W Michelmore; Steven J Knapp; Loren H Rieseberg
Journal:  Mol Biol Evol       Date:  2008-08-26       Impact factor: 16.240

4.  Many or most genes in Arabidopsis transposed after the origin of the order Brassicales.

Authors:  Michael Freeling; Eric Lyons; Brent Pedersen; Maqsudul Alam; Ray Ming; Damon Lisch
Journal:  Genome Res       Date:  2008-10-03       Impact factor: 9.043

5.  Global eQTL mapping reveals the complex genetic architecture of transcript-level variation in Arabidopsis.

Authors:  Marilyn A L West; Kyunga Kim; Daniel J Kliebenstein; Hans van Leeuwen; Richard W Michelmore; R W Doerge; Dina A St Clair
Journal:  Genetics       Date:  2006-12-18       Impact factor: 4.562

6.  The bicoid protein determines position in the Drosophila embryo in a concentration-dependent manner.

Authors:  W Driever; C Nüsslein-Volhard
Journal:  Cell       Date:  1988-07-01       Impact factor: 41.582

7.  Dosage dependent modifiers of white alleles in Drosophila melanogaster.

Authors:  J F Sabl; J A Birchler
Journal:  Genet Res       Date:  1993-08       Impact factor: 1.588

8.  Natural alleles at a tomato fruit size quantitative trait locus differ by heterochronic regulatory mutations.

Authors:  Bin Cong; Jiping Liu; Steven D Tanksley
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-07       Impact factor: 11.205

9.  Manipulations of endosperm balance number overcome crossing barriers between diploid solanum species.

Authors:  S A Johnston; R E Hanneman
Journal:  Science       Date:  1982-07-30       Impact factor: 47.728

10.  Levels of homeotic protein function can determine developmental identity: evidence from low-level expression of the Drosophila homeotic gene proboscipedia under Hsp70 control.

Authors:  D L Cribbs; C Benassayag; F M Randazzo; T C Kaufman
Journal:  EMBO J       Date:  1995-02-15       Impact factor: 11.598

View more
  112 in total

Review 1.  The sex-specific region of sex chromosomes in animals and plants.

Authors:  Andrea R Gschwend; Laura A Weingartner; Richard C Moore; Ray Ming
Journal:  Chromosome Res       Date:  2012-01       Impact factor: 5.239

2.  Heterosis.

Authors:  James A Birchler; Hong Yao; Sivanandan Chudalayandi; Daniel Vaiman; Reiner A Veitia
Journal:  Plant Cell       Date:  2010-07-09       Impact factor: 11.277

3.  Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy.

Authors:  Haibao Tang; Margaret R Woodhouse; Feng Cheng; James C Schnable; Brent S Pedersen; Gavin Conant; Xiaowu Wang; Michael Freeling; J Chris Pires
Journal:  Genetics       Date:  2012-02-02       Impact factor: 4.562

4.  Sequence and expression variation in SUPPRESSOR of OVEREXPRESSION of CONSTANS 1 (SOC1): homeolog evolution in Indian Brassicas.

Authors:  Tanu Sri; Pratiksha Mayee; Anandita Singh
Journal:  Dev Genes Evol       Date:  2015-08-15       Impact factor: 0.900

5.  Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication.

Authors:  Jeremy E Coate; Jessica A Schlueter; Adam M Whaley; Jeff J Doyle
Journal:  Plant Physiol       Date:  2011-02-02       Impact factor: 8.340

6.  Grass microRNA gene paleohistory unveils new insights into gene dosage balance in subgenome partitioning after whole-genome duplication.

Authors:  Michael Abrouk; Rongzhi Zhang; Florent Murat; Aili Li; Caroline Pont; Long Mao; Jérôme Salse
Journal:  Plant Cell       Date:  2012-05-15       Impact factor: 11.277

7.  Patterns and Consequences of Subgenome Differentiation Provide Insights into the Nature of Paleopolyploidy in Plants.

Authors:  Meixia Zhao; Biao Zhang; Damon Lisch; Jianxin Ma
Journal:  Plant Cell       Date:  2017-11-27       Impact factor: 11.277

Review 8.  Divergent evolutionary fates of major photosynthetic gene networks following gene and whole genome duplications.

Authors:  Jeremy E Coate; Jeff J Doyle
Journal:  Plant Signal Behav       Date:  2011-04-01

9.  Function relaxation followed by diversifying selection after whole-genome duplication in flowering plants.

Authors:  Hui Guo; Tae-Ho Lee; Xiyin Wang; Andrew H Paterson
Journal:  Plant Physiol       Date:  2013-04-11       Impact factor: 8.340

10.  Subcellular Relocalization and Positive Selection Play Key Roles in the Retention of Duplicate Genes of Populus Class III Peroxidase Family.

Authors:  Lin-Ling Ren; Yan-Jing Liu; Hai-Jing Liu; Ting-Ting Qian; Li-Wang Qi; Xiao-Ru Wang; Qing-Yin Zeng
Journal:  Plant Cell       Date:  2014-06-16       Impact factor: 11.277

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.