Literature DB >> 19924926

C and N isotope fractionation suggests similar mechanisms of microbial atrazine transformation despite involvement of different enzymes (AtzA and TrzN).

Armin H Meyer1, Holger Penning, Martin Elsner.   

Abstract

Transformation of atrazine to hydroxyatrazine in the environment may be underestimated by current assessment schemes since immobilization and further transformation of the metabolite can render parent-to-daughter compound ratios unreliable. This study reports significant C and N isotope fractionation of atrazine in transformation to hydroxyatrazine by Chelatobacter heintzii, Pseudomonas sp. ADP, and Arthrobacter aurescens TC1 highlighting an alternative approach to detecting this natural transformation pathway. Indistinguishable dual isotope slopes big up tri, open (= delta(15)N/delta(13)C approximately epsilon(N)/epsilon(C)) for Chelatobacter heintzii (-0.65 +/- 0.08) and Arthrobacter aurescens TC1 (-0.61 +/- 0.02) suggest the same biochemical transformation mechanism despite different hydrolyzing enzymes (AtzA versus TrzN). With Pseudomonas sp. ADP (also AtzA) significantly smaller fractionation indicates masking effects by steps prior to enzyme catalysis, while a distinguishable big up tri, open = -0.32 +/- 0.06 suggests that some of these steps showed slight isotope fractionation. Abiotic reference experiments reproduced the pattern of biotic transformation at pH 3 (enrichment of (13)C, depletion of (15)N in atrazine), but showed enrichment of both (13)C and (15)N at pH 12. This indicates that the organisms activated atrazine by a similar Lewis acid complexation (e.g., with H(+)) prior to nucleophilic aromatic substitution, giving the first detailed mechanistic insight into this important enzymatic reaction.

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Year:  2009        PMID: 19924926     DOI: 10.1021/es9013618

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  8 in total

1.  X-ray structure and mutational analysis of the atrazine Chlorohydrolase TrzN.

Authors:  Jennifer L Seffernick; Erik Reynolds; Alexander A Fedorov; Elena Fedorov; Steven C Almo; Michael J Sadowsky; Lawrence P Wackett
Journal:  J Biol Chem       Date:  2010-07-20       Impact factor: 5.157

2.  Kinetic isotope effects of C and N indicate different transformation mechanisms between atzA- and trzN-harboring strains in dechlorination of atrazine.

Authors:  Songsong Chen; Limin Ma; Yuncai Wang
Journal:  Biodegradation       Date:  2022-03-07       Impact factor: 3.909

3.  Mechanistic Studies of Palladium-Catalyzed Aminocarbonylation of Aryl Chlorides with Carbon Monoxide and Ammonia.

Authors:  Justin Y Wang; Alexandra E Strom; John F Hartwig
Journal:  J Am Chem Soc       Date:  2018-06-18       Impact factor: 16.383

4.  Rate-Limiting Mass Transfer in Micropollutant Degradation Revealed by Isotope Fractionation in Chemostat.

Authors:  Benno N Ehrl; Kankana Kundu; Mehdi Gharasoo; Sviatlana Marozava; Martin Elsner
Journal:  Environ Sci Technol       Date:  2018-12-19       Impact factor: 9.028

5.  Isotope Fractionation Pinpoints Membrane Permeability as a Barrier to Atrazine Biodegradation in Gram-negative Polaromonas sp. Nea-C.

Authors:  Benno N Ehrl; Mehdi Gharasoo; Martin Elsner
Journal:  Environ Sci Technol       Date:  2018-03-23       Impact factor: 9.028

6.  Defining lower limits of biodegradation: atrazine degradation regulated by mass transfer and maintenance demand in Arthrobacter aurescens TC1.

Authors:  Kankana Kundu; Sviatlana Marozava; Benno Ehrl; Juliane Merl-Pham; Christian Griebler; Martin Elsner
Journal:  ISME J       Date:  2019-05-09       Impact factor: 10.302

7.  Linking Increased Isotope Fractionation at Low Concentrations to Enzyme Activity Regulation: 4-Cl Phenol Degradation by Arthrobacter chlorophenolicus A6.

Authors:  Kankana Kundu; Aileen Melsbach; Benjamin Heckel; Sarah Schneidemann; Dheeraj Kanapathi; Sviatlana Marozava; Juliane Merl-Pham; Martin Elsner
Journal:  Environ Sci Technol       Date:  2022-02-11       Impact factor: 9.028

8.  Modeling of Contaminant Biodegradation and Compound-Specific Isotope Fractionation in Chemostats at Low Dilution Rates.

Authors:  Mehdi Gharasoo; Benno N Ehrl; Olaf A Cirpka; Martin Elsner
Journal:  Environ Sci Technol       Date:  2019-01-07       Impact factor: 9.028

  8 in total

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