Literature DB >> 19924709

Genetic Analysis Workshop 16: introduction to workshop summaries.

Jean W MacCluer1, Christopher I Amos, Peter K Gregersen, Nancy Heard-Costa, Monica Lee, Aldi T Kraja, Ingrid B Borecki, L Adrienne Cupples, Laura Almasy.   

Abstract

Genetic Analysis Workshop 16 (GAW16) was held on September 17-20, 2008 in St. Louis, Missouri. The focus of GAW16 was on methods and challenges in analysis of single-nucleotide polymorphism data from genome-wide scans. GAW16 attracted 221 participants from 12 countries. The 168 contributions were organized into 17 discussion groups of 6-17 papers each. Three data sets were available for analysis. Two of these were data from ongoing studies, generously provided by the investigators. The North American Rheumatoid Arthritis Consortium provided case-control data on rheumatoid arthritis, and the Framingham Heart Study (FHS) made available information on cardiovascular risk factors for participants in three generations of pedigree data. The third data set included simulated phenotypes for participants in the FHS, using actual pedigree structures and genotypes. This volume includes a paper for each of the 17 discussion groups, summarizing their main findings. (c) 2009 Wiley-Liss, Inc.

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Year:  2009        PMID: 19924709      PMCID: PMC2987734          DOI: 10.1002/gepi.20464

Source DB:  PubMed          Journal:  Genet Epidemiol        ISSN: 0741-0395            Impact factor:   2.135


  8 in total

1.  The New York Cancer Project: rationale, organization, design, and baseline characteristics.

Authors:  Maria K Mitchell; Peter K Gregersen; Stephen Johnson; Ramon Parsons; David Vlahov
Journal:  J Urban Health       Date:  2004-06       Impact factor: 3.671

2.  Replication of putative candidate-gene associations with rheumatoid arthritis in >4,000 samples from North America and Sweden: association of susceptibility with PTPN22, CTLA4, and PADI4.

Authors:  Robert M Plenge; Leonid Padyukov; Elaine F Remmers; Shaun Purcell; Annette T Lee; Elizabeth W Karlson; Frederick Wolfe; Daniel L Kastner; Lars Alfredsson; David Altshuler; Peter K Gregersen; Lars Klareskog; John D Rioux
Journal:  Am J Hum Genet       Date:  2005-11-01       Impact factor: 11.025

3.  TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study.

Authors:  Robert M Plenge; Mark Seielstad; Leonid Padyukov; Annette T Lee; Elaine F Remmers; Bo Ding; Anthony Liew; Houman Khalili; Alamelu Chandrasekaran; Leela R L Davies; Wentian Li; Adrian K S Tan; Carine Bonnard; Rick T H Ong; Anbupalam Thalamuthu; Sven Pettersson; Chunyu Liu; Chao Tian; Wei V Chen; John P Carulli; Evan M Beckman; David Altshuler; Lars Alfredsson; Lindsey A Criswell; Christopher I Amos; Michael F Seldin; Daniel L Kastner; Lars Klareskog; Peter K Gregersen
Journal:  N Engl J Med       Date:  2007-09-05       Impact factor: 91.245

4.  Genetic Analysis Workshop II: summary.

Authors:  J W MacCluer; C T Falk; R S Spielman; D K Wagener
Journal:  Genet Epidemiol       Date:  1984       Impact factor: 2.135

5.  Data for Genetic Analysis Workshop 16 Problem 1, association analysis of rheumatoid arthritis data.

Authors:  Christopher I Amos; Wei Vivien Chen; Michael F Seldin; Elaine F Remmers; Kimberly E Taylor; Lindsey A Criswell; Annette T Lee; Robert M Plenge; Daniel L Kastner; Peter K Gregersen
Journal:  BMC Proc       Date:  2009-12-15

6.  Genetic Analysis Workshop 16: Strategies for genome-wide association study analyses.

Authors:  L Adrienne Cupples; Joseph Beyene; Heike Bickeböller; E Warwick Daw; M Daniele Fallin; W James Gauderman; Saurabh Ghosh; Ellen L Goode; Elizabeth R Hauser; Anthony Hinrichs; Jack W Kent; Lisa J Martin; Maria Martinez; Rosalind J Neuman; Michael Province; Silke Szymczak; Marsha A Wilcox; Andreas Ziegler; Jean W Maccluer; Laura Almasy
Journal:  BMC Proc       Date:  2009-12-15

7.  The Genetic Analysis Workshop 16 Problem 3: simulation of heritable longitudinal cardiovascular phenotypes based on actual genome-wide single-nucleotide polymorphisms in the Framingham Heart Study.

Authors:  Aldi T Kraja; Robert Culverhouse; E Warwick Daw; Jun Wu; Andrew Van Brunt; Michael A Province; Ingrid B Borecki
Journal:  BMC Proc       Date:  2009-12-15

8.  Genetics Analysis Workshop 16 Problem 2: the Framingham Heart Study data.

Authors:  L Adrienne Cupples; Nancy Heard-Costa; Monica Lee; Larry D Atwood
Journal:  BMC Proc       Date:  2009-12-15
  8 in total
  3 in total

1.  Flexible estimation of covariance function by penalized spline with application to longitudinal family data.

Authors:  Yuanjia Wang
Journal:  Stat Med       Date:  2011-04-13       Impact factor: 2.373

2.  Longitudinal association analysis of quantitative traits.

Authors:  Ruzong Fan; Yiwei Zhang; Paul S Albert; Aiyi Liu; Yuanjia Wang; Momiao Xiong
Journal:  Genet Epidemiol       Date:  2012-09-10       Impact factor: 2.135

3.  Modified entropy-based procedure detects gene-gene-interactions in unconventional genetic models.

Authors:  Jörg Malten; Inke R König
Journal:  BMC Med Genomics       Date:  2020-04-23       Impact factor: 3.063

  3 in total

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