Literature DB >> 19923742

Purification, crystallization and preliminary X-ray diffraction analysis of disease-related mutants of p97.

Wai Kwan Tang1, Dongyang Li, Lothar Esser, Di Xia.   

Abstract

The human type II AAA+ protein p97 participates in various cellular activities, presumably through its involvement in the ubiquitin-proteasome degradation pathway. Mutations in p97 have been implicated in patients with inclusion-body myopathy associated with Paget's disease of the bone and frontotemporal dementia (IBMPFD). In this work, three mutant p97 N-D1 fragments, R86A, R95G and R155H, were crystallized in the presence of ATPgammaS with PEG 3350 as a main precipitant, yielding two different crystal forms. The R155H mutant crystal belonged to space group R3, with unit-cell parameters in the hexagonal setting of a = b = 134.2, c = 182.9 angstrom, and was merohedrally twinned, with an estimated twin fraction of 0.34. The crystals of the R86A and R95G mutants belonged to space group P1, with similar unit-cell parameters of a = 90.89, b = 102.6, c = 107.2 angstrom, alpha = 97.5, beta = 90.6, gamma = 91.5 degrees and a = 92.76, b = 103.7, c = 107.7 angstrom , alpha = 97.7, beta = 91.9, gamma = 89.7 degrees, respectively.

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Year:  2009        PMID: 19923742      PMCID: PMC2777050          DOI: 10.1107/S174430910904055X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  26 in total

1.  Structure of the AAA ATPase p97.

Authors:  X Zhang; A Shaw; P A Bates; R H Newman; B Gowen; E Orlova; M A Gorman; H Kondo; P Dokurno; J Lally; G Leonard; H Meyer; M van Heel; P S Freemont
Journal:  Mol Cell       Date:  2000-12       Impact factor: 17.970

2.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

3.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

4.  Likelihood-enhanced fast rotation functions.

Authors:  Laurent C Storoni; Airlie J McCoy; Randy J Read
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-02-25

5.  Mutant valosin-containing protein causes a novel type of frontotemporal dementia.

Authors:  Rolf Schröder; Giles D J Watts; Sarju G Mehta; Bernd O Evert; Petra Broich; Klaus Fliessbach; Katharina Pauls; Volkmar H Hans; Virginia Kimonis; Dietmar R Thal
Journal:  Ann Neurol       Date:  2005-03       Impact factor: 10.422

6.  Complete structure of p97/valosin-containing protein reveals communication between nucleotide domains.

Authors:  Byron DeLaBarre; Axel T Brunger
Journal:  Nat Struct Biol       Date:  2003-08-31

Review 7.  Molecular perspectives on p97-VCP: progress in understanding its structure and diverse biological functions.

Authors:  Qing Wang; Changcheng Song; Chou-Chi H Li
Journal:  J Struct Biol       Date:  2004 Apr-May       Impact factor: 2.867

8.  The crystal structure of murine p97/VCP at 3.6A.

Authors:  Trevor Huyton; Valerie E Pye; Louise C Briggs; Terence C Flynn; Fabienne Beuron; Hisao Kondo; Jianpeng Ma; Xiaodong Zhang; Paul S Freemont
Journal:  J Struct Biol       Date:  2003-12       Impact factor: 2.867

9.  Structural basis of the interaction between the AAA ATPase p97/VCP and its adaptor protein p47.

Authors:  Ingrid Dreveny; Hisao Kondo; Keiji Uchiyama; Anthony Shaw; Xiaodong Zhang; Paul S Freemont
Journal:  EMBO J       Date:  2004-02-26       Impact factor: 11.598

10.  Clinical and molecular studies in a unique family with autosomal dominant limb-girdle muscular dystrophy and Paget disease of bone.

Authors:  V E Kimonis; M J Kovach; B Waggoner; S Leal; A Salam; L Rimer; K Davis; R Khardori; D Gelber
Journal:  Genet Med       Date:  2000 Jul-Aug       Impact factor: 8.822

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  2 in total

1.  A novel ATP-dependent conformation in p97 N-D1 fragment revealed by crystal structures of disease-related mutants.

Authors:  Wai Kwan Tang; Dongyang Li; Chou-chi Li; Lothar Esser; Renming Dai; Liang Guo; Di Xia
Journal:  EMBO J       Date:  2010-05-28       Impact factor: 11.598

2.  Altered intersubunit communication is the molecular basis for functional defects of pathogenic p97 mutants.

Authors:  Wai Kwan Tang; Di Xia
Journal:  J Biol Chem       Date:  2013-11-06       Impact factor: 5.157

  2 in total

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