Literature DB >> 19923721

The 1.9 A structure of the branched-chain amino-acid transaminase (IlvE) from Mycobacterium tuberculosis.

L W Tremblay1, J S Blanchard.   

Abstract

Unlike mammals, bacteria encode enzymes that synthesize branched-chain amino acids. The pyridoxal 50-phosphate-dependent transaminase performs the final biosynthetic step in these pathways, converting keto acid precursors into -amino acids. The branched-chain amino-acid transaminase from Mycobacterium tuberculosis (MtIlvE) has been crystallized and its structure has been solved at 1.9 angstrom resolution. The MtIlvE monomer is composed of two domains that interact to form the active site. The biologically active form of IlvE is a homodimer in which each monomer contributes a substrate-specificity loop to the partner molecule. Additional substrate selectivity may be imparted by a conserved N-terminal Phe30 residue, which has previously been observed to shield the active site in the type IV fold homodimer. The active site of MtIlvE contains density corresponding to bound PMP, which is likely to be a consequence of the presence of tryptone in the crystallization medium. Additionally, two cysteine residues are positioned at the dimer interface for disulfide-bond formation under oxidative conditions. It is unknown whether they are involved in any regulatory activities analogous to those of the human mitochondrial branched-chain amino-acid transaminase.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19923721      PMCID: PMC2777029          DOI: 10.1107/S1744309109036690

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  23 in total

1.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

2.  Multiple transcripts encoded by the ilvGMEDA gene cluster of Escherichia coli K-12.

Authors:  F Huang; G Coppola; D H Calhoun
Journal:  J Bacteriol       Date:  1992-08       Impact factor: 3.490

3.  Modeling of the spatial structure of eukaryotic ornithine decarboxylases.

Authors:  N V Grishin; M A Phillips; E J Goldsmith
Journal:  Protein Sci       Date:  1995-07       Impact factor: 6.725

4.  Three-dimensional structure of Escherichia coli branched-chain amino acid aminotransferase at 2.5 A resolution.

Authors:  K Okada; K Hirotsu; M Sato; H Hayashi; H Kagamiyama
Journal:  J Biochem       Date:  1997-04       Impact factor: 3.387

5.  Structures of Escherichia coli branched-chain amino acid aminotransferase and its complexes with 4-methylvalerate and 2-methylleucine: induced fit and substrate recognition of the enzyme.

Authors:  K Okada; K Hirotsu; H Hayashi; H Kagamiyama
Journal:  Biochemistry       Date:  2001-06-26       Impact factor: 3.162

6.  Slow-onset feedback inhibition: inhibition of Mycobacterium tuberculosis alpha-isopropylmalate synthase by L-leucine.

Authors:  Luiz P S de Carvalho; Argyrides Argyrou; John S Blanchard
Journal:  J Am Chem Soc       Date:  2005-07-20       Impact factor: 15.419

7.  Crystal structures of branched-chain amino acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme.

Authors:  Masaru Goto; Ikuko Miyahara; Hideyuki Hayashi; Hiroyuki Kagamiyama; Ken Hirotsu
Journal:  Biochemistry       Date:  2003-04-08       Impact factor: 3.162

8.  Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.

Authors:  S T Cole; R Brosch; J Parkhill; T Garnier; C Churcher; D Harris; S V Gordon; K Eiglmeier; S Gas; C E Barry; F Tekaia; K Badcock; D Basham; D Brown; T Chillingworth; R Connor; R Davies; K Devlin; T Feltwell; S Gentles; N Hamlin; S Holroyd; T Hornsby; K Jagels; A Krogh; J McLean; S Moule; L Murphy; K Oliver; J Osborne; M A Quail; M A Rajandream; J Rogers; S Rutter; K Seeger; J Skelton; R Squares; S Squares; J E Sulston; K Taylor; S Whitehead; B G Barrell
Journal:  Nature       Date:  1998-06-11       Impact factor: 49.962

9.  A heterospecific leucine zipper tetramer.

Authors:  Yiqun Deng; Jie Liu; Qi Zheng; Qunnu Li; Neville R Kallenbach; Min Lu
Journal:  Chem Biol       Date:  2008-09-22

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

View more
  8 in total

1.  Characterization of the branched-chain amino acid aminotransferase enzyme family in tomato.

Authors:  Gregory S Maloney; Andrej Kochevenko; Denise M Tieman; Takayuki Tohge; Uri Krieger; Dani Zamir; Mark G Taylor; Alisdair R Fernie; Harry J Klee
Journal:  Plant Physiol       Date:  2010-04-30       Impact factor: 8.340

2.  Mechanism-Based Inhibition of the Mycobacterium tuberculosis Branched-Chain Aminotransferase by d- and l-Cycloserine.

Authors:  Tathyana Mar Amorim Franco; Lorenza Favrot; Olivia Vergnolle; John S Blanchard
Journal:  ACS Chem Biol       Date:  2017-03-16       Impact factor: 5.100

3.  Role of Wax Ester Synthase/Acyl Coenzyme A:Diacylglycerol Acyltransferase in Oleaginous Streptomyces sp. Strain G25.

Authors:  Annika Röttig; Carl Simon Strittmatter; Jennifer Schauer; Sebastian Hiessl; Anja Poehlein; Rolf Daniel; Alexander Steinbüchel
Journal:  Appl Environ Microbiol       Date:  2016-09-16       Impact factor: 4.792

4.  First structure of archaeal branched-chain amino acid aminotransferase from Thermoproteus uzoniensis specific for L-amino acids and R-amines.

Authors:  Konstantin M Boyko; Tatiana N Stekhanova; Alena Yu Nikolaeva; Andrey V Mardanov; Andrey L Rakitin; Nikolai V Ravin; Ekaterina Yu Bezsudnova; Vladimir O Popov
Journal:  Extremophiles       Date:  2016-02-12       Impact factor: 2.395

5.  Chemical Mechanism of the Branched-Chain Aminotransferase IlvE from Mycobacterium tuberculosis.

Authors:  Tathyana M Amorim Franco; Subray Hegde; John S Blanchard
Journal:  Biochemistry       Date:  2016-11-02       Impact factor: 3.162

Review 6.  Bacterial Branched-Chain Amino Acid Biosynthesis: Structures, Mechanisms, and Drugability.

Authors:  Tathyana M Amorim Franco; John S Blanchard
Journal:  Biochemistry       Date:  2017-11-07       Impact factor: 3.162

7.  Discovery and structural characterisation of new fold type IV-transaminases exemplify the diversity of this enzyme fold.

Authors:  Tea Pavkov-Keller; Gernot A Strohmeier; Matthias Diepold; Wilco Peeters; Natascha Smeets; Martin Schürmann; Karl Gruber; Helmut Schwab; Kerstin Steiner
Journal:  Sci Rep       Date:  2016-12-01       Impact factor: 4.379

8.  Intracellular Mycobacterium tuberculosis Exploits Multiple Host Nitrogen Sources during Growth in Human Macrophages.

Authors:  Khushboo Borah; Martin Beyß; Axel Theorell; Huihai Wu; Piyali Basu; Tom A Mendum; Katharina Nӧh; Dany J V Beste; Johnjoe McFadden
Journal:  Cell Rep       Date:  2019-12-10       Impact factor: 9.423

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.