Literature DB >> 19921549

1H, 15N and 13C assignments of the dimeric C-terminal domain of HIV-1 capsid protein.

Jinwon Jung1, In-Ja L Byeon, Jinwoo Ahn, Jason Concel, Angela M Gronenborn.   

Abstract

HIV-1 capsid protein (CA) encloses the viral RNA genome and forms a conical-shaped particle in the mature HIV-1 virion, with orderly capsid assembly and disassembly critically important for viral infectivity. The 231 residue CA is composed of two helical domains, connected by a short linker sequence. In solution, CA exhibits concentration dependent dimerization which is mediated by the C-terminal domain (CTD). Here, we present nearly complete (1)H, (15)N and (13)C assignments for the 20 kDa homodimeric CA-CTD, a prerequisite for structural characterization of the CA-CTD dimer.

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Year:  2009        PMID: 19921549      PMCID: PMC3448961          DOI: 10.1007/s12104-009-9198-9

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  9 in total

1.  Image reconstructions of helical assemblies of the HIV-1 CA protein.

Authors:  S Li; C P Hill; W I Sundquist; J T Finch
Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

2.  The HIV-1 capsid protein C-terminal domain in complex with a virus assembly inhibitor.

Authors:  François Ternois; Jana Sticht; Stéphane Duquerroy; Hans-Georg Kräusslich; Félix A Rey
Journal:  Nat Struct Mol Biol       Date:  2005-07-24       Impact factor: 15.369

3.  Flexibility in HIV-1 assembly subunits: solution structure of the monomeric C-terminal domain of the capsid protein.

Authors:  Luis A Alcaraz; Marta del Alamo; Francisco N Barrera; Mauricio G Mateu; José L Neira
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

4.  Solution structure of a double mutant of the carboxy-terminal dimerization domain of the HIV-1 capsid protein.

Authors:  Hing C Wong; Ronald Shin; N Rama Krishna
Journal:  Biochemistry       Date:  2008-01-26       Impact factor: 3.162

5.  Structure of the carboxyl-terminal dimerization domain of the HIV-1 capsid protein.

Authors:  T R Gamble; S Yoo; F F Vajdos; U K von Schwedler; D K Worthylake; H Wang; J P McCutcheon; W I Sundquist; C P Hill
Journal:  Science       Date:  1997-10-31       Impact factor: 47.728

6.  A simultaneous (15)N, (1)H- and (13)C, (1)H-HSQC with sensitivity enhancement and a heteronuclear gradient echo.

Authors:  M Sattler; M Maurer; J Schleucher; C Griesinger
Journal:  J Biomol NMR       Date:  1995-01       Impact factor: 2.835

Review 7.  Determining the structures of large proteins and protein complexes by NMR.

Authors:  G M Clore; A M Gronenborn
Journal:  Trends Biotechnol       Date:  1998-01       Impact factor: 19.536

8.  Assembly and analysis of conical models for the HIV-1 core.

Authors:  B K Ganser; S Li; V Y Klishko; J T Finch; W I Sundquist
Journal:  Science       Date:  1999-01-01       Impact factor: 47.728

9.  Structure of full-length HIV-1 CA: a model for the mature capsid lattice.

Authors:  Barbie K Ganser-Pornillos; Anchi Cheng; Mark Yeager
Journal:  Cell       Date:  2007-10-05       Impact factor: 41.582

  9 in total
  6 in total

1.  Magic angle spinning NMR reveals sequence-dependent structural plasticity, dynamics, and the spacer peptide 1 conformation in HIV-1 capsid protein assemblies.

Authors:  Yun Han; Guangjin Hou; Christopher L Suiter; Jinwoo Ahn; In-Ja L Byeon; Andrew S Lipton; Sarah Burton; Ivan Hung; Peter L Gor'kov; Zhehong Gan; William Brey; David Rice; Angela M Gronenborn; Tatyana Polenova
Journal:  J Am Chem Soc       Date:  2013-11-13       Impact factor: 15.419

2.  Motions on the millisecond time scale and multiple conformations of HIV-1 capsid protein: implications for structural polymorphism of CA assemblies.

Authors:  In-Ja L Byeon; Guangjin Hou; Yun Han; Christopher L Suiter; Jinwoo Ahn; Jinwon Jung; Chang-Hyeock Byeon; Angela M Gronenborn; Tatyana Polenova
Journal:  J Am Chem Soc       Date:  2012-04-02       Impact factor: 15.419

3.  Dynamic Nuclear Polarization Magic-Angle Spinning Nuclear Magnetic Resonance Combined with Molecular Dynamics Simulations Permits Detection of Order and Disorder in Viral Assemblies.

Authors:  Rupal Gupta; Huilan Zhang; Manman Lu; Guangjin Hou; Marc Caporini; Melanie Rosay; Werner Maas; Jochem Struppe; Jinwoo Ahn; In-Ja L Byeon; Hartmut Oschkinat; Kristaps Jaudzems; Emeline Barbet-Massin; Lyndon Emsley; Guido Pintacuda; Anne Lesage; Angela M Gronenborn; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2019-06-11       Impact factor: 2.991

4.  1H-13C/1H-15N heteronuclear dipolar recoupling by R-symmetry sequences under fast magic angle spinning for dynamics analysis of biological and organic solids.

Authors:  Guangjin Hou; In-Ja L Byeon; Jinwoo Ahn; Angela M Gronenborn; Tatyana Polenova
Journal:  J Am Chem Soc       Date:  2011-10-28       Impact factor: 15.419

5.  Dynamic Nuclear Polarization Enhanced MAS NMR Spectroscopy for Structural Analysis of HIV-1 Protein Assemblies.

Authors:  Rupal Gupta; Manman Lu; Guangjin Hou; Marc A Caporini; Melanie Rosay; Werner Maas; Jochem Struppe; Christopher Suiter; Jinwoo Ahn; In-Ja L Byeon; W Trent Franks; Marcella Orwick-Rydmark; Andrea Bertarello; Hartmut Oschkinat; Anne Lesage; Guido Pintacuda; Angela M Gronenborn; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2016-01-12       Impact factor: 2.991

6.  Ebselen, a Small-Molecule Capsid Inhibitor of HIV-1 Replication.

Authors:  Suzie Thenin-Houssier; Ian Mitchelle S de Vera; Laura Pedro-Rosa; Angela Brady; Audrey Richard; Briana Konnick; Silvana Opp; Cindy Buffone; Jakob Fuhrmann; Smitha Kota; Blase Billack; Magdalena Pietka-Ottlik; Timothy Tellinghuisen; Hyeryun Choe; Timothy Spicer; Louis Scampavia; Felipe Diaz-Griffero; Douglas J Kojetin; Susana T Valente
Journal:  Antimicrob Agents Chemother       Date:  2016-03-25       Impact factor: 5.191

  6 in total

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