Literature DB >> 19921412

Cloning, expression, and enzymatic characterization of isocitrate dehydrogenase from Helicobacter pylori.

Dongsheng Huang1, Junwei Liu, Guoliang Shen.   

Abstract

Isocitrate dehydrogenase (IDH) catalyzes the oxidative decarboxylation of isocitrate to alpha-ketoglutarate with NAD(P) as a cofactor in the tricarboxylic acid cycle. As a housekeeping protein in Helicobacter pylori, IDH was considered as a possible candidate for serological diagnostics and detection. Here, we identified a new icd gene encoding IDH from H. pylori strain SS1. The recombinant H. pylori isocitrate dehydrogenase (HpIDH) was cloned, expressed, and purified in E. coli system. The enzymatic characterization of HpIDH demonstrates its activity with k (cat) of 87 s(-1), K (m) of 124 microM and k (cat)/K (m) of 7 x 10(5) M(-1)s(-1) toward isocitrate, k (cat) of 80 s(-1), K (m) of 176 microM and k (cat)/K (m) of 4.5 x 10(5) M(-1)s(-1) toward NADP. The optimum pH of the enzyme activity is around 9.0, and the optimum temperature is around 50 degrees C. This current work is expected to help better understand the features of HpIDH and provide useful information for H. pylori serological diagnostics and detection.

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Year:  2009        PMID: 19921412     DOI: 10.1007/s10930-009-9212-1

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  14 in total

1.  Biochemical characterization of isocitrate dehydrogenase from Methylococcus capsulatus reveals a unique NAD+-dependent homotetrameric enzyme.

Authors:  Runar Stokke; Dominique Madern; Anita-Elin Fedøy; Solveig Karlsen; Nils-Kåre Birkeland; Ida Helene Steen
Journal:  Arch Microbiol       Date:  2006-12-12       Impact factor: 2.552

2.  Access to phosphorylation in isocitrate dehydrogenase may occur by domain shifting.

Authors:  J Finer-Moore; S E Tsutakawa; D R Cherbavaz; D C LaPorte; D E Koshland; R M Stroud
Journal:  Biochemistry       Date:  1997-11-11       Impact factor: 3.162

3.  Unidentified curved bacilli in the stomach of patients with gastritis and peptic ulceration.

Authors:  B J Marshall; J R Warren
Journal:  Lancet       Date:  1984-06-16       Impact factor: 79.321

4.  The tricarboxylic acid cycle of Helicobacter pylori.

Authors:  S M Pitson; G L Mendz; S Srinivasan; S L Hazell
Journal:  Eur J Biochem       Date:  1999-02

5.  Crystal structure of Bacillus subtilis isocitrate dehydrogenase at 1.55 A. Insights into the nature of substrate specificity exhibited by Escherichia coli isocitrate dehydrogenase kinase/phosphatase.

Authors:  S K Singh; K Matsuno; D C LaPorte; L J Banaszak
Journal:  J Biol Chem       Date:  2001-04-04       Impact factor: 5.157

6.  Comparison of isocitrate dehydrogenase from three hyperthermophiles reveals differences in thermostability, cofactor specificity, oligomeric state, and phylogenetic affiliation.

Authors:  I H Steen; D Madern; M Karlström; T Lien; R Ladenstein; N K Birkeland
Journal:  J Biol Chem       Date:  2001-08-31       Impact factor: 5.157

7.  Glucose utilization and lactate production by Helicobacter pylori.

Authors:  G L Mendz; S L Hazell; B P Burns
Journal:  J Gen Microbiol       Date:  1993-12

8.  Structural and functional properties of isocitrate dehydrogenase from the psychrophilic bacterium Desulfotalea psychrophila reveal a cold-active enzyme with an unusual high thermal stability.

Authors:  Anita-Elin Fedøy; Nannan Yang; Aurora Martinez; Hanna-Kirsti S Leiros; Ida Helene Steen
Journal:  J Mol Biol       Date:  2007-06-19       Impact factor: 5.469

9.  Thermal stability of isocitrate dehydrogenase from Archaeoglobus fulgidus studied by crystal structure analysis and engineering of chimers.

Authors:  Runar Stokke; Mikael Karlström; Nannan Yang; Ingar Leiros; Rudolf Ladenstein; Nils Kåre Birkeland; Ida Helene Steen
Journal:  Extremophiles       Date:  2007-03-31       Impact factor: 3.035

10.  Isocitrate dehydrogenase of Helicobacter pylori potentially induces humoral immune response in subjects with peptic ulcer disease and gastritis.

Authors:  M Abid Hussain; Shaik A Naveed; Leonardo A Sechi; Sarita Ranjan; Ayesha Alvi; Irshad Ahmed; Akash Ranjan; Sangita Mukhopadhyay; Niyaz Ahmed
Journal:  PLoS One       Date:  2008-01-23       Impact factor: 3.240

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  4 in total

1.  Expression and characterization of a novel isocitrate dehydrogenase from Streptomyces diastaticus No. 7 strain M1033.

Authors:  Bei-Bei Zhang; Peng Wang; Ao Wang; Wen-Cai Wang; Wang-Gang Tang; Guo-Ping Zhu
Journal:  Mol Biol Rep       Date:  2012-10-17       Impact factor: 2.316

2.  Control of carbon flux to glutamate excretion in Klebsiella pneumoniae: the role of the indigenous plasmid and its encoded isocitrate dehydrogenase.

Authors:  Mansi El-Mansi; Francois Trappey; Ewan Clark; Malcolm Campbell
Journal:  J Ind Microbiol Biotechnol       Date:  2015-09-29       Impact factor: 3.346

3.  Biochemical Characterization and Complete Conversion of Coenzyme Specificity of Isocitrate Dehydrogenase from Bifidobacterium longum.

Authors:  Shi-Ping Huang; Hong-Mei Cheng; Peng Wang; Guo-Ping Zhu
Journal:  Int J Mol Sci       Date:  2016-02-26       Impact factor: 5.923

4.  Biochemical and molecular characterization of the isocitrate dehydrogenase with dual coenzyme specificity from the obligate methylotroph Methylobacillus Flagellatus.

Authors:  Anastasia Y Romkina; Michael Y Kiriukhin
Journal:  PLoS One       Date:  2017-04-19       Impact factor: 3.240

  4 in total

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