Literature DB >> 19915043

Tertiary structure and characterization of a glycoside hydrolase family 44 endoglucanase from Clostridium acetobutylicum.

Christopher D Warner1, Julie A Hoy, Taran C Shilling, Michael J Linnen, Nathaniel D Ginder, Clark F Ford, Richard B Honzatko, Peter J Reilly.   

Abstract

A gene encoding a glycoside hydrolase family 44 (GH44) protein from Clostridium acetobutylicum ATCC 824 was synthesized and transformed into Escherichia coli. The previously uncharacterized protein was expressed with a C-terminal His tag and purified by nickel-nitrilotriacetic acid affinity chromatography. Crystallization and X-ray diffraction to a 2.2-A resolution revealed a triose phosphate isomerase (TIM) barrel-like structure with additional Greek key and beta-sandwich folds, similar to other GH44 crystal structures. The enzyme hydrolyzes cellotetraose and larger cellooligosaccharides, yielding an unbalanced product distribution, including some glucose. It attacks carboxymethylcellulose and xylan at approximately the same rates. Its activity on carboxymethylcellulose is much higher than that of the isolated C. acetobutylicum cellulosome. It also extensively converts lichenan to oligosaccharides of intermediate size and attacks Avicel to a limited extent. The enzyme has an optimal temperature in a 10-min assay of 55 degrees C and an optimal pH of 5.0.

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Year:  2009        PMID: 19915043      PMCID: PMC2798630          DOI: 10.1128/AEM.02026-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  29 in total

1.  Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.

Authors:  P J Haney; J H Badger; G L Buldak; C I Reich; C R Woese; G J Olsen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

2.  Exhaustive matching of the entire protein sequence database.

Authors:  G H Gonnet; M A Cohen; S A Benner
Journal:  Science       Date:  1992-06-05       Impact factor: 47.728

3.  Two-step method to isolate target recombinant protein from co-purified bacterial contaminant SlyD after immobilised metal affinity chromatography.

Authors:  Céline B Parsy; Caroline J Chapman; Antony C Barnes; John F Robertson; Andrea Murray
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2007-04-08       Impact factor: 3.205

4.  Cellulolytic Activity of Clostridium acetobutylicum.

Authors:  S F Lee; C W Forsberg; L N Gibbins
Journal:  Appl Environ Microbiol       Date:  1985-08       Impact factor: 4.792

5.  Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum.

Authors:  J Nölling; G Breton; M V Omelchenko; K S Makarova; Q Zeng; R Gibson; H M Lee; J Dubois; D Qiu; J Hitti; Y I Wolf; R L Tatusov; F Sabathe; L Doucette-Stamm; P Soucaille; M J Daly; G N Bennett; E V Koonin; D R Smith
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

6.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

7.  Cloning and expression of Clostridium acetobutylicum endoglucanase, cellobiase and amino acid biosynthesis genes in Escherichia coli.

Authors:  H Zappe; D T Jones; D R Woods
Journal:  J Gen Microbiol       Date:  1986-05

8.  Protein production by auto-induction in high density shaking cultures.

Authors:  F William Studier
Journal:  Protein Expr Purif       Date:  2005-05       Impact factor: 1.650

9.  Production by Clostridium acetobutylicum ATCC 824 of CelG, a cellulosomal glycoside hydrolase belonging to family 9.

Authors:  Ana M López-Contreras; Aernout A Martens; Nora Szijarto; Hans Mooibroek; Pieternel A M Claassen; John van der Oost; Willem M de Vos
Journal:  Appl Environ Microbiol       Date:  2003-02       Impact factor: 4.792

10.  Characterization of the cellulolytic complex (cellulosome) of Clostridium acetobutylicum.

Authors:  Fabrice Sabathé; Anne Bélaïch; Philippe Soucaille
Journal:  FEMS Microbiol Lett       Date:  2002-11-19       Impact factor: 2.742

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  5 in total

1.  Structure and activity of Paenibacillus polymyxa xyloglucanase from glycoside hydrolase family 44.

Authors:  Antonio Ariza; Jens M Eklöf; Oliver Spadiut; Wendy A Offen; Shirley M Roberts; Werner Besenmatter; Esben P Friis; Michael Skjøt; Keith S Wilson; Harry Brumer; Gideon Davies
Journal:  J Biol Chem       Date:  2011-07-27       Impact factor: 5.157

2.  Molecular and biochemical analyses of the GH44 module of CbMan5B/Cel44A, a bifunctional enzyme from the hyperthermophilic bacterium Caldicellulosiruptor bescii.

Authors:  Libin Ye; Xiaoyun Su; George E Schmitz; Young Hwan Moon; Jing Zhang; Roderick I Mackie; Isaac K O Cann
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

3.  A xylose-stimulated xylanase-xylose binding protein chimera created by random nonhomologous recombination.

Authors:  Lucas Ferreira Ribeiro; Jennifer Tullman; Nathan Nicholes; Sérgio Ruschi Bergamachi Silva; Davi Serradella Vieira; Marc Ostermeier; Richard John Ward
Journal:  Biotechnol Biofuels       Date:  2016-06-06       Impact factor: 6.040

Review 4.  Cellulases from Thermophiles Found by Metagenomics.

Authors:  Juan-José Escuder-Rodríguez; María-Eugenia DeCastro; María-Esperanza Cerdán; Esther Rodríguez-Belmonte; Manuel Becerra; María-Isabel González-Siso
Journal:  Microorganisms       Date:  2018-07-10

5.  Minimalistic Cellulosome of the Butanologenic Bacterium Clostridium saccharoperbutylacetonicum.

Authors:  Bosmat Levi Hevroni; Sarah Moraïs; Yonit Ben-David; Ely Morag; Edward A Bayer
Journal:  mBio       Date:  2020-03-31       Impact factor: 7.867

  5 in total

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