Literature DB >> 19915032

Quantification of cyprinid herpesvirus 3 in environmental water by using an external standard virus.

Mie N Honjo1, Toshifumi Minamoto, Kazuaki Matsui, Kimiko Uchii, Hiroki Yamanaka, Alata A Suzuki, Yukihiro Kohmatsu, Takaji Iida, Zen'ichiro Kawabata.   

Abstract

Cyprinid herpesvirus 3 (CyHV-3), a lethal DNA virus that spreads in natural lakes and rivers, infects common carp and koi. We established a quantification method for CyHV-3 that includes a viral concentration method and quantitative PCR combined with an external standard virus. Viral concentration methods were compared using the cation-coated filter and ultrafiltration methods. The recovery of virus-like particles was similar for the two methods (cation-coated filter method, 44%+/-19%, n=3; ultrafiltration method, 50%+/-3%, n=3); however, the former method was faster and more suitable for routine determinations. The recovery of seeded CyHV-3 based on the cation-coated filter method varied by more than 3 orders of magnitude among the water samples. The recovery yield of CyHV-3 was significantly correlated with that of the seeded lambda phage, and the average ratio of lambda to the CyHV-3 recovery yield was 1.4, indicating that lambda is useful as an external standard virus for determining the recovery yield of CyHV-3. Therefore, to quantify CyHV-3 in environmental water, a known amount of lambda was added as an external standard virus to each water sample. Using this method, CyHV-3 DNA was detected in 6 of the 10 (60%) types of environmental water tested; the highest concentration of CyHV-3 DNA was 2x10(5) copies liter(-1). The lowest recovery limit of CyHV-3 DNA was 60 copies liter(-1). This method is practical for monitoring CyHV-3 abundance in environmental water.

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Year:  2009        PMID: 19915032      PMCID: PMC2798649          DOI: 10.1128/AEM.02011-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  22 in total

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Authors:  Eiji Haramoto; Hiroyuki Katayama; Kumiko Oguma; Shinichiro Ohgaki
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

2.  Detection and quantification of hepatitis A virus in seawater via real-time RT-PCR.

Authors:  Hilary A Brooks; Richard M Gersberg; Arun K Dhar
Journal:  J Virol Methods       Date:  2005-08       Impact factor: 2.014

3.  Detection of koi herpesvirus DNA in river water in Japan.

Authors:  E Haramoto; M Kitajima; H Katayama; S Ohgaki
Journal:  J Fish Dis       Date:  2007-01       Impact factor: 2.767

4.  Concentrations of a Koi herpesvirus (KHV) in tissues of experimentally infected Cyprinus carpio koi as assessed by real-time TaqMan PCR.

Authors:  Oren Gilad; Susan Yun; Francisco J Zagmutt-Vergara; Christian M Leutenegger; Herve Bercovier; Ronald P Hedrick
Journal:  Dis Aquat Organ       Date:  2004-09-08       Impact factor: 1.802

5.  Polyethylene glycol precipitation for recovery of pathogenic viruses, including hepatitis A virus and human rotavirus, from oyster, water, and sediment samples.

Authors:  G D Lewis; T G Metcalf
Journal:  Appl Environ Microbiol       Date:  1988-08       Impact factor: 4.792

6.  Influence of salts on electrostatic interactions between poliovirus and membrane filters.

Authors:  P A Shields; S R Farrah
Journal:  Appl Environ Microbiol       Date:  1983-02       Impact factor: 4.792

7.  Seasonal distribution of cyprinid herpesvirus 3 in Lake Biwa, Japan.

Authors:  Toshifumi Minamoto; Mie N Honjo; Zen'ichiro Kawabata
Journal:  Appl Environ Microbiol       Date:  2009-09-04       Impact factor: 4.792

8.  Effects of humic materials on virus recovery from water.

Authors:  N Guttman-Bass; J Catalano-Sherman
Journal:  Appl Environ Microbiol       Date:  1985-05       Impact factor: 4.792

9.  Detection of cyprinid herpesvirus 3 DNA in river water during and after an outbreak.

Authors:  Toshifumi Minamoto; Mie N Honjo; Kimiko Uchii; Hiroki Yamanaka; Alata A Suzuki; Yukihiro Kohmatsu; Takaji Iida; Zen'ichiro Kawabata
Journal:  Vet Microbiol       Date:  2008-10-09       Impact factor: 3.293

Review 10.  Characterization of a novel virus causing a lethal disease in carp and koi.

Authors:  Maya Ilouze; Arnon Dishon; Moshe Kotler
Journal:  Microbiol Mol Biol Rev       Date:  2006-03       Impact factor: 11.056

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  13 in total

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2.  Cell Culture Isolation of Piscine Nodavirus (Betanodavirus) in Fish-Rearing Seawater.

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3.  Transmission dynamics of an emerging infectious disease in wildlife through host reproductive cycles.

Authors:  Kimiko Uchii; Arndt Telschow; Toshifumi Minamoto; Hiroki Yamanaka; Mie N Honjo; Kazuaki Matsui; Zen'ichiro Kawabata
Journal:  ISME J       Date:  2010-08-26       Impact factor: 10.302

Review 4.  CyHV-3: the third cyprinid herpesvirus.

Authors:  Michael Gotesman; Julia Kattlun; Sven M Bergmann; Mansour El-Matbouli
Journal:  Dis Aquat Organ       Date:  2013-07-22       Impact factor: 1.802

Review 5.  Cyprinid herpesvirus 3: an interesting virus for applied and fundamental research.

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Journal:  Vet Res       Date:  2013-09-27       Impact factor: 3.683

Review 6.  Cyprinid viral diseases and vaccine development.

Authors:  Hang Su; Jianguo Su
Journal:  Fish Shellfish Immunol       Date:  2018-09-07       Impact factor: 4.581

7.  Investigation of bacterial diversity and pathogen abundances in gibel carp (Carassius auratus gibelio) ponds during a cyprinid herpesvirus 2 outbreak.

Authors:  Tianming Gao; Bingjian Cui; Xiao Kong; Zhihui Bai; Xuliang Zhuang; Zhi Qian
Journal:  Microbiologyopen       Date:  2019-08-20       Impact factor: 3.139

8.  Application of Environmental DNA for Monitoring Red Sea Bream Iridovirus at a Fish Farm.

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9.  Detection of SARS-CoV-2 in wastewater in Japan during a COVID-19 outbreak.

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10.  Surveillance of SARS-CoV-2 in Sewage Treatment Plants between January 2020 and July 2021 in Taiwan.

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Journal:  Pathogens       Date:  2021-12-10
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