Literature DB >> 19913558

Model with two types of CTL regulation and experiments on CTL dynamics.

R A Sergeev1, R E Batorsky, I M Rouzine.   

Abstract

Recently, we developn class="Chemical">ed a mathematical model of interaction between the HIV and the immune system to match various dynamic experiments carried out in HIV-infected humans and SIV-infected macaques. The model includes helper cell-dependent and helper cell-independent cytotoxic lymphocytes (CTLs) and predicts two stable steady states, a state with a high virus load and few helper cells, and another state with a low virus load and many helper cells. Here we upgrade the model to take into account recent reports on the link between the activation status of infected cells and their ability to produce virus, the effect of helper cells at the time of priming on CTL differentiation, and virus dynamics in unvaccinated macaques with a broad genetic background acutely infected with SIVmac251. We also discuss in detail the experimental justification of the CTL block and the robustness of model predictions with respect to the hypothesis of two CTL subtypes. Copyright 2009 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19913558      PMCID: PMC2827655          DOI: 10.1016/j.jtbi.2009.11.003

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  82 in total

1.  Differential regulation of antiviral T-cell immunity results in stable CD8+ but declining CD4+ T-cell memory.

Authors:  D Homann; L Teyton; M B Oldstone
Journal:  Nat Med       Date:  2001-08       Impact factor: 53.440

2.  Recruitment times, proliferation, and apoptosis rates during the CD8(+) T-cell response to lymphocytic choriomeningitis virus.

Authors:  R J De Boer; M Oprea; R Antia; K Murali-Krishna; R Ahmed; A S Perelson
Journal:  J Virol       Date:  2001-11       Impact factor: 5.103

3.  Decay kinetics of human immunodeficiency virus-specific CD8+ T cells in peripheral blood after initiation of highly active antiretroviral therapy.

Authors:  J P Casazza; M R Betts; L J Picker; R A Koup
Journal:  J Virol       Date:  2001-07       Impact factor: 5.103

4.  Helper-dependent vs. helper-independent CTL responses in HIV infection: implications for drug therapy and resistance.

Authors:  D Wodarz
Journal:  J Theor Biol       Date:  2001-12-07       Impact factor: 2.691

5.  Critical role for alpha/beta and gamma interferons in persistence of lymphocytic choriomeningitis virus by clonal exhaustion of cytotoxic T cells.

Authors:  R Ou; S Zhou; L Huang; D Moskophidis
Journal:  J Virol       Date:  2001-09       Impact factor: 5.103

6.  Modeling deuterated glucose labeling of T-lymphocytes.

Authors:  Ruy M Ribeiro; Hiroshi Mohri; David D Ho; Alan S Perelson
Journal:  Bull Math Biol       Date:  2002-03       Impact factor: 1.758

7.  Cytopathic killing of peripheral blood CD4(+) T lymphocytes by human immunodeficiency virus type 1 appears necrotic rather than apoptotic and does not require env.

Authors:  Michael J Lenardo; Sara B Angleman; Viengngeun Bounkeua; Joseph Dimas; Melody G Duvall; Moses B Graubard; Felicita Hornung; Marianne C Selkirk; Christina K Speirs; Carol Trageser; Jan O Orenstein; Diane L Bolton
Journal:  J Virol       Date:  2002-05       Impact factor: 5.103

8.  Death of CD4(+) T-cell lines caused by human immunodeficiency virus type 1 does not depend on caspases or apoptosis.

Authors:  Diane L Bolton; Beom-Ik Hahn; Eugenia A Park; Laura L Lehnhoff; Felicita Hornung; Michael J Lenardo
Journal:  J Virol       Date:  2002-05       Impact factor: 5.103

9.  Functionally inert HIV-specific cytotoxic T lymphocytes do not play a major role in chronically infected adults and children.

Authors:  P J Goulder; Y Tang; C Brander; M R Betts; M Altfeld; K Annamalai; A Trocha; S He; E S Rosenberg; G Ogg; C A O'Callaghan; S A Kalams; R E McKinney; K Mayer; R A Koup; S I Pelton; S K Burchett; K McIntosh; B D Walker
Journal:  J Exp Med       Date:  2000-12-18       Impact factor: 14.307

10.  Clustered mutations in HIV-1 gag are consistently required for escape from HLA-B27-restricted cytotoxic T lymphocyte responses.

Authors:  A D Kelleher; C Long; E C Holmes; R L Allen; J Wilson; C Conlon; C Workman; S Shaunak; K Olson; P Goulder; C Brander; G Ogg; J S Sullivan; W Dyer; I Jones; A J McMichael; S Rowland-Jones; R E Phillips
Journal:  J Exp Med       Date:  2001-02-05       Impact factor: 14.307

View more
  7 in total

1.  Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection.

Authors:  Rebecca Batorsky; Mary F Kearney; Sarah E Palmer; Frank Maldarelli; Igor M Rouzine; John M Coffin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-21       Impact factor: 11.205

2.  Design requirements for interfering particles to maintain coadaptive stability with HIV-1.

Authors:  Igor M Rouzine; Leor S Weinberger
Journal:  J Virol       Date:  2012-12-05       Impact factor: 5.103

3.  Interpreting the effect of vaccination on steady state infection in animals challenged with Simian immunodeficiency virus.

Authors:  R A Sergeev; R E Batorsky; J M Coffin; I M Rouzine
Journal:  J Theor Biol       Date:  2009-12-23       Impact factor: 2.691

4.  Implications of CTL-mediated killing of HIV-infected cells during the non-productive stage of infection.

Authors:  Christian L Althaus; Rob J De Boer
Journal:  PLoS One       Date:  2011-02-07       Impact factor: 3.240

5.  Simple mathematical models do not accurately predict early SIV dynamics.

Authors:  Cecilia Noecker; Krista Schaefer; Kelly Zaccheo; Yiding Yang; Judy Day; Vitaly V Ganusov
Journal:  Viruses       Date:  2015-03-13       Impact factor: 5.048

6.  The route of HIV escape from immune response targeting multiple sites is determined by the cost-benefit tradeoff of escape mutations.

Authors:  Rebecca Batorsky; Rinat A Sergeev; Igor M Rouzine
Journal:  PLoS Comput Biol       Date:  2014-10-30       Impact factor: 4.475

7.  Defining Kinetic Properties of HIV-Specific CD8⁺ T-Cell Responses in Acute Infection.

Authors:  Yiding Yang; Vitaly V Ganusov
Journal:  Microorganisms       Date:  2019-03-04
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.