Literature DB >> 19906247

Rapid analysis of Jatropha curcas gene functions by virus-induced gene silencing.

Jian Ye1, Jing Qu, Ha Thi Ngoc Bui, Nam-Hai Chua.   

Abstract

Jatropha curcas L. is a small, woody tree of the Euphorbiaceae family. This plant can grow on marginal land in the tropical and subtropical regions and produces seeds containing up to 30% oil. Several Asian countries have selected Jatropha for large scale planting as a biodiesel feedstock. Nevertheless, Jatropha also possesses several undesirable traits that may limit its wide adoption. An improved understanding of plant development and the regulation of fatty acid (FA) and triacylglyceride biosynthesis in Jatropha is particularly facilitative for the development of elite crops. Here, we show that a tobacco rattle virus (TRV) vector can trigger virus-induced gene silencing (VIGS) in Jatropha. Our optimized method produced robust and reliable gene silencing in plants agroinoculated with recombinant TRV harbouring Jatropha gene sequences. We used VIGS to investigate possible functions of 13 Jatropha genes of several functional categories, including FA biosynthesis, developmental regulation and toxin biosynthesis, etc. Based on the effects of VIGS on the FA composition of newly emerged leaves, we determined the function of several genes implicated in FA biosynthesis. Moreover, VIGS was able to discriminate independent functions of related gene family members. Our results show that VIGS can be used for high-throughput screening of Jatropha genes whose functions can be assayed in leaves.

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Year:  2009        PMID: 19906247     DOI: 10.1111/j.1467-7652.2009.00457.x

Source DB:  PubMed          Journal:  Plant Biotechnol J        ISSN: 1467-7644            Impact factor:   9.803


  28 in total

1.  Comparative transcriptomic analysis of high- and low-oil Camellia oleifera reveals a coordinated mechanism for the regulation of upstream and downstream multigenes for high oleic acid accumulation.

Authors:  Bo Wu; Chengjiang Ruan; Ping Han; Dong Ruan; ChaoWei Xiong; Jian Ding; Sihei Liu
Journal:  3 Biotech       Date:  2019-06-08       Impact factor: 2.406

2.  Coupling virus-induced gene silencing to exogenous green fluorescence protein expression provides a highly efficient system for functional genomics in Arabidopsis and across all stages of tomato fruit development.

Authors:  Leandro Quadrana; Maria Cecilia Rodriguez; Mariana López; Luisa Bermúdez; Adriano Nunes-Nesi; Alisdair R Fernie; Adriana Descalzo; Ramón Asis; Magdalena Rossi; Sebastian Asurmendi; Fernando Carrari
Journal:  Plant Physiol       Date:  2011-04-29       Impact factor: 8.340

Review 3.  Molecular approaches to improvement of Jatropha curcas Linn. as a sustainable energy crop.

Authors:  T Sudhakar Johnson; Nalini Eswaran; M Sujatha
Journal:  Plant Cell Rep       Date:  2011-05-17       Impact factor: 4.570

4.  Virus-induced gene silencing as a tool for comparative functional studies in Thalictrum.

Authors:  Verónica S Di Stilio; Rachana A Kumar; Alessandra M Oddone; Theadora R Tolkin; Patricia Salles; Kacie McCarty
Journal:  PLoS One       Date:  2010-08-10       Impact factor: 3.240

5.  RNAi Mediated curcin precursor gene silencing in Jatropha (Jatropha curcas L.).

Authors:  Vikas Yadav Patade; Deepti Khatri; Kamal Kumar; Atul Grover; Maya Kumari; Sanjay Mohan Gupta; Devender Kumar; Mohammed Nasim
Journal:  Mol Biol Rep       Date:  2014-02-27       Impact factor: 2.316

6.  Dissecting functions of KATANIN and WRINKLED1 in cotton fiber development by virus-induced gene silencing.

Authors:  Jing Qu; Jian Ye; Yun-Feng Geng; Yan-Wei Sun; Shi-Qiang Gao; Bi-Pei Zhang; Wen Chen; Nam-Hai Chua
Journal:  Plant Physiol       Date:  2012-07-26       Impact factor: 8.340

7.  Identification of candidate genes JcARF19 and JcIAA9 associated with seed size traits in Jatropha.

Authors:  Jian Ye; Peng Liu; Chengsong Zhu; Jing Qu; Xianghua Wang; Yanwei Sun; Fei Sun; Yulin Jiang; Genhua Yue; Chunming Wang
Journal:  Funct Integr Genomics       Date:  2014-09-17       Impact factor: 3.410

8.  Phenotyping of VIGS-mediated gene silencing in rice using a vector derived from a DNA virus.

Authors:  Ravi Kant; Indranil Dasgupta
Journal:  Plant Cell Rep       Date:  2017-05-24       Impact factor: 4.570

9.  Sequence analysis of the genome of an oil-bearing tree, Jatropha curcas L.

Authors:  Shusei Sato; Hideki Hirakawa; Sachiko Isobe; Eigo Fukai; Akiko Watanabe; Midori Kato; Kumiko Kawashima; Chiharu Minami; Akiko Muraki; Naomi Nakazaki; Chika Takahashi; Shinobu Nakayama; Yoshie Kishida; Mitsuyo Kohara; Manabu Yamada; Hisano Tsuruoka; Shigemi Sasamoto; Satoshi Tabata; Tomoyuki Aizu; Atsushi Toyoda; Tadasu Shin-i; Yohei Minakuchi; Yuji Kohara; Asao Fujiyama; Suguru Tsuchimoto; Shin'ichiro Kajiyama; Eri Makigano; Nobuko Ohmido; Nakako Shibagaki; Joyce A Cartagena; Naoki Wada; Tsutomu Kohinata; Alipour Atefeh; Shota Yuasa; Sachihiro Matsunaga; Kiichi Fukui
Journal:  DNA Res       Date:  2010-12-13       Impact factor: 4.458

10.  A first generation microsatellite- and SNP-based linkage map of Jatropha.

Authors:  Chun Ming Wang; Peng Liu; Chengxin Yi; Keyu Gu; Fei Sun; Lei Li; Loong Chueng Lo; Xiaokun Liu; Felicia Feng; Grace Lin; Suying Cao; Yan Hong; Zhongchao Yin; Gen Hua Yue
Journal:  PLoS One       Date:  2011-08-25       Impact factor: 3.240

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