Literature DB >> 19900443

Low Complexity Regions behave as tRNA sponges to help co-translational folding of plasmodial proteins.

Magali Frugier1, Tania Bour, Maya Ayach, Manuel A S Santos, Joëlle Rudinger-Thirion, Anne Théobald-Dietrich, Elizabetta Pizzi.   

Abstract

In most organisms, the information necessary to specify the native 3D-structures of proteins is encoded in the corresponding mRNA sequences. Translational accuracy and efficiency are coupled and sequences that are slowly translated play an essential role in the concomitant folding of protein domains. Here, we suggest that the well-known mechanisms for the regulation of translational efficiency, which involves mRNA structure and/or asymmetric tRNA abundance, do not apply to all organisms. We propose that Plasmodium, the parasite responsible for malaria, uses an alternative strategy to slow down ribosomal speed and avoid multidomain protein misfolding during translation. In our model, the abundant Low Complexity Regions present in Plasmodium proteins replace the codon preferences, which influence the assembly of protein secondary structures.

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Year:  2010        PMID: 19900443     DOI: 10.1016/j.febslet.2009.11.004

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  20 in total

1.  Diverse single-amino-acid repeat profiles in the genus Cryptosporidium.

Authors:  Giovanni Widmer
Journal:  Parasitology       Date:  2018-02-12       Impact factor: 3.234

2.  Evolutionary pressures and codon bias in low complexity regions of plasmodia.

Authors:  Andrea Cappannini; Sergio Forcelloni; Andrea Giansanti
Journal:  Genetica       Date:  2021-07-12       Impact factor: 1.082

3.  Low-complexity regions in Plasmodium falciparum: missing links in the evolution of an extreme genome.

Authors:  Martine M Zilversmit; Sarah K Volkman; Mark A DePristo; Dyann F Wirth; Philip Awadalla; Daniel L Hartl
Journal:  Mol Biol Evol       Date:  2010-04-28       Impact factor: 16.240

4.  The protein aggregation inhibitor YAT2150 has potent antimalarial activity in Plasmodium falciparum in vitro cultures.

Authors:  Inés Bouzón-Arnáiz; Yunuen Avalos-Padilla; Arnau Biosca; Omar Caño-Prades; Lucía Román-Álamo; Javier Valle; David Andreu; Diana Moita; Miguel Prudêncio; Elsa M Arce; Diego Muñoz-Torrero; Xavier Fernàndez-Busquets
Journal:  BMC Biol       Date:  2022-10-22       Impact factor: 7.364

Review 5.  An evolutionary perspective on the kinome of malaria parasites.

Authors:  Eric Talevich; Andrew B Tobin; Natarajan Kannan; Christian Doerig
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-09-19       Impact factor: 6.237

6.  Aminoacylation of Plasmodium falciparum tRNA(Asn) and insights in the synthesis of asparagine repeats.

Authors:  Denis Filisetti; Anne Théobald-Dietrich; Nassira Mahmoudi; Joëlle Rudinger-Thirion; Ermanno Candolfi; Magali Frugier
Journal:  J Biol Chem       Date:  2013-11-06       Impact factor: 5.157

Review 7.  Repetitive sequences in malaria parasite proteins.

Authors:  Heledd M Davies; Stephanie D Nofal; Emilia J McLaughlin; Andrew R Osborne
Journal:  FEMS Microbiol Rev       Date:  2017-11-01       Impact factor: 16.408

8.  Extreme mutation bias and high AT content in Plasmodium falciparum.

Authors:  William L Hamilton; Antoine Claessens; Thomas D Otto; Mihir Kekre; Rick M Fairhurst; Julian C Rayner; Dominic Kwiatkowski
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971

9.  Increased polymorphism near low-complexity sequences across the genomes of Plasmodium falciparum isolates.

Authors:  Wilfried Haerty; G Brian Golding
Journal:  Genome Biol Evol       Date:  2011-05-21       Impact factor: 3.416

Review 10.  Asparagine repeats in Plasmodium falciparum proteins: good for nothing?

Authors:  Vasant Muralidharan; Daniel E Goldberg
Journal:  PLoS Pathog       Date:  2013-08-22       Impact factor: 6.823

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