Literature DB >> 19899129

A quantitative measure for alterations in the actin cytoskeleton investigated with automated high-throughput microscopy.

Julian Weichsel1, Nikolas Herold, Maik J Lehmann, Hans-Georg Kräusslich, Ulrich S Schwarz.   

Abstract

The actin cytoskeleton modulates a large variety of physiological and disease-related processes in the cell. For example, actin has been shown to be a crucial host factor for successful infection by HIV-1, but the underlying mechanistic details are still unknown. Automated approaches open up the perspective to clarify such an issue by processing many samples in a high-throughput manner. To analyze the alterations in the actin cytoskeleton within an automated setting, large-scale image acquisition and analysis were established for JC-53 cells stained for actin. As a quantitative measure in such an automated approach, we suggest a parameter called image coherency. We successfully benchmarked our analysis by calculating coherency for both a biophysical model of the actin cytoskeleton and for cells whose actin architecture had been disturbed pharmacologically by latrunculin B or cytochalasin D. We then tested the influence of HIV-1 infection on actin coherency, but observed no significant differences between uninfected and infected cells.

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Year:  2010        PMID: 19899129     DOI: 10.1002/cyto.a.20818

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.355


  20 in total

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2.  Localizing and extracting filament distributions from microscopy images.

Authors:  S Basu; C Liu; G K Rohde
Journal:  J Microsc       Date:  2014-12-30       Impact factor: 1.758

3.  Single-site sonoporation disrupts actin cytoskeleton organization.

Authors:  Xian Chen; Ruen Shan Leow; Yaxin Hu; Jennifer M F Wan; Alfred C H Yu
Journal:  J R Soc Interface       Date:  2014-03-26       Impact factor: 4.118

4.  Extraction of Individual Filaments from 2D Confocal Microscopy Images of Flat Cells.

Authors:  Saurav Basu; Gustavo Kunde Rohde
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2015 May-Jun       Impact factor: 3.710

5.  Investigating the role of F-actin in human immunodeficiency virus assembly by live-cell microscopy.

Authors:  Sheikh Abdul Rahman; Peter Koch; Julian Weichsel; William J Godinez; Ulrich Schwarz; Karl Rohr; Don C Lamb; Hans-Georg Kräusslich; Barbara Müller
Journal:  J Virol       Date:  2014-04-30       Impact factor: 5.103

6.  Localizing and extracting filament distributions from microscopy images.

Authors:  S Basu; K N Dahl; G K Rohde
Journal:  J Microsc       Date:  2013-04       Impact factor: 1.758

7.  Quantitative analysis of F-actin redistribution in astrocytoma cells treated with candidate pharmaceuticals.

Authors:  Stephen Lockett; Chrissie Verma; Alla Brafman; Prabhakar Gudla; Kaustav Nandy; Yoshihiro Mimaki; Philip L Fuchs; Joseph Jaja; Karlyne M Reilly; John Beutler; Thomas J Turbyville
Journal:  Cytometry A       Date:  2014-02-11       Impact factor: 4.355

8.  Morphogenesis of the Infectious HIV-1 Virion.

Authors:  Jun-Ichi Sakuragi
Journal:  Front Microbiol       Date:  2011-12-09       Impact factor: 5.640

9.  Cell elasticity is regulated by the tropomyosin isoform composition of the actin cytoskeleton.

Authors:  Iman Jalilian; Celine Heu; Hong Cheng; Hannah Freittag; Melissa Desouza; Justine R Stehn; Nicole S Bryce; Renee M Whan; Edna C Hardeman; Thomas Fath; Galina Schevzov; Peter W Gunning
Journal:  PLoS One       Date:  2015-05-15       Impact factor: 3.240

10.  Toxicity evaluation following intratracheal instillation of iron oxide in a silica matrix in rats.

Authors:  Alina Mihaela Prodan; Carmen Steluta Ciobanu; Cristina Liana Popa; Simona Liliana Iconaru; Daniela Predoi
Journal:  Biomed Res Int       Date:  2014-05-14       Impact factor: 3.411

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