Literature DB >> 19897921

Genome-wide identification, structure and expression studies, and mutant collection of 22 early nodulin-like protein genes in Arabidopsis.

Kiyoshi Mashiguchi1, Tadao Asami, Yoshihito Suzuki.   

Abstract

Early nodulin-like proteins (ENODLs) are chimeric arabinogalactan proteins (AGPs) related to the phytocyanin family. Although they show similarities with other phytocyanins, they lack amino acid residues for copper binding. Despite the existence of other phytocyanins, information about the function of ENODLs in plants is largely lacking. In this study, we characterized ENODL genes consisting of 22 members in Arabidopsis thaliana. Structure prediction indicated that most ENODLs are glycosylphosphatidylinositol-anchored chimeric AGPs. Expression analysis by real-time reverse transcription polymerase chain reaction indicated that most ENODL genes showed spatially specific expression, mainly in the flower organs. Furthermore, we obtained and analyzed 26 homozygous T-DNA insertion lines of 15 ENODL genes, but novel biological roles were not uncovered, probably due to functional redundancy. The detailed phylogenetic and expression analyses and characterization of the available insertion lines in this study might facilitate future studies to elucidate the biological roles of ENODLs.

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Year:  2009        PMID: 19897921     DOI: 10.1271/bbb.90407

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  26 in total

Review 1.  Arabinogalactan proteins in root and pollen-tube cells: distribution and functional aspects.

Authors:  Eric Nguema-Ona; Sílvia Coimbra; Maïté Vicré-Gibouin; Jean-Claude Mollet; Azeddine Driouich
Journal:  Ann Bot       Date:  2012-07       Impact factor: 4.357

2.  Gene expression in mycorrhizal orchid protocorms suggests a friendly plant-fungus relationship.

Authors:  Silvia Perotto; Marco Rodda; Alex Benetti; Fabiano Sillo; Enrico Ercole; Michele Rodda; Mariangela Girlanda; Claude Murat; Raffaella Balestrini
Journal:  Planta       Date:  2014-04-24       Impact factor: 4.116

3.  Transcriptome dynamics of the stomatal lineage: birth, amplification, and termination of a self-renewing population.

Authors:  Jessika Adrian; Jessica Chang; Catherine E Ballenger; Bastiaan O R Bargmann; Julien Alassimone; Kelli A Davies; On Sun Lau; Juliana L Matos; Charles Hachez; Amy Lanctot; Anne Vatén; Kenneth D Birnbaum; Dominique C Bergmann
Journal:  Dev Cell       Date:  2015-04-06       Impact factor: 12.270

Review 4.  Arabinogalactan proteins and their sugar chains: functions in plant reproduction, research methods, and biosynthesis.

Authors:  Shihao Su; Tetsuya Higashiyama
Journal:  Plant Reprod       Date:  2018-02-22       Impact factor: 3.767

5.  Roles of arabinogalactan proteins in cotyledon formation and cell wall deposition during embryo development of Arabidopsis.

Authors:  Jing Zhong; YuJun Ren; Miao Yu; TengFei Ma; XueLian Zhang; Jie Zhao
Journal:  Protoplasma       Date:  2010-09-10       Impact factor: 3.356

6.  Genomic dissection of an extended phenotype: Oak galling by a cynipid gall wasp.

Authors:  Jack Hearn; Mark Blaxter; Karsten Schönrogge; José-Luis Nieves-Aldrey; Juli Pujade-Villar; Elisabeth Huguet; Jean-Michel Drezen; Joseph D Shorthouse; Graham N Stone
Journal:  PLoS Genet       Date:  2019-11-04       Impact factor: 5.917

7.  Plant and fungal gene expression in mycorrhizal protocorms of the orchid Serapias vomeracea colonized by Tulasnella calospora.

Authors:  Raffaella Balestrini; Luca Nerva; Fabiano Sillo; Mariangela Girlanda; Silvia Perotto
Journal:  Plant Signal Behav       Date:  2014

8.  Maternal ENODLs Are Required for Pollen Tube Reception in Arabidopsis.

Authors:  Yingnan Hou; Xinyang Guo; Philipp Cyprys; Ying Zhang; Andrea Bleckmann; Le Cai; Qingpei Huang; Yu Luo; Hongya Gu; Thomas Dresselhaus; Juan Dong; Li-Jia Qu
Journal:  Curr Biol       Date:  2016-08-11       Impact factor: 10.834

9.  Genome-wide identification, classification, and expression analysis of the arabinogalactan protein gene family in rice (Oryza sativa L.).

Authors:  Haoli Ma; Jie Zhao
Journal:  J Exp Bot       Date:  2010-04-27       Impact factor: 6.992

10.  The putative phytocyanin genes in Chinese cabbage (Brassica rapa L.): genome-wide identification, classification and expression analysis.

Authors:  Jun Li; Guizhen Gao; Tianyao Zhang; Xiaoming Wu
Journal:  Mol Genet Genomics       Date:  2012-12-02       Impact factor: 3.291

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