Literature DB >> 19890987

The Hofmeister effect on amyloid formation using yeast prion protein.

Victor Yeh1, James M Broering, Andrey Romanyuk, Buxin Chen, Yury O Chernoff, Andreas S Bommarius.   

Abstract

A variety of proteins are capable of converting from their soluble forms into highly ordered fibrous cross-beta aggregates (amyloids). This conversion is associated with certain pathological conditions in mammals, such as Alzheimer disease, and provides a basis for the infectious or hereditary protein isoforms (prions), causing neurodegenerative disorders in mammals and controlling heritable phenotypes in yeast. The N-proximal region of the yeast prion protein Sup35 (Sup35NM) is frequently used as a model system for amyloid conversion studies in vitro. Traditionally, amyloids are recognized by their ability to bind Congo Red dye specific to beta-sheet rich structures. However, methods for quantifying amyloid fibril formation thus far were based on measurements linking Congo Red absorbance to concentration of insulin fibrils and may not be directly applicable to other amyloid-forming proteins. Here, we present a corrected formula for measuring amyloid formation of Sup35NM by Congo Red assay. By utilizing this corrected procedure, we explore the effect of different sodium salts on the lag time and maximum rate of amyloid formation by Sup35NM. We find that increased kosmotropicity promotes amyloid polymerization in accordance with the Hofmeister series. In contrast, chaotropes inhibit polymerization, with the strength of inhibition correlating with the B-viscosity coefficient of the Jones-Dole equation, an increasingly accepted measure for the quantification of the Hofmeister series.

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Year:  2010        PMID: 19890987      PMCID: PMC2817838          DOI: 10.1002/pro.281

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  34 in total

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Authors:  C M Dobson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-02-28       Impact factor: 6.237

2.  The role of conformational flexibility in prion propagation and maintenance for Sup35p.

Authors:  T Scheibel; S L Lindquist
Journal:  Nat Struct Biol       Date:  2001-11

3.  Amyloidosis: a convoluted story.

Authors:  R A Kyle
Journal:  Br J Haematol       Date:  2001-09       Impact factor: 6.998

Review 4.  Analysis of prion factors in yeast.

Authors:  Yury O Chernoff; Susan M Uptain; Susan L Lindquist
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

5.  Manipulating the amyloid-beta aggregation pathway with chemical chaperones.

Authors:  D S Yang; C M Yip; T H Huang; A Chakrabartty; P E Fraser
Journal:  J Biol Chem       Date:  1999-11-12       Impact factor: 5.157

6.  Nucleated conformational conversion and the replication of conformational information by a prion determinant.

Authors:  T R Serio; A G Cashikar; A S Kowal; G J Sawicki; J J Moslehi; L Serpell; M F Arnsdorf; S L Lindquist
Journal:  Science       Date:  2000-08-25       Impact factor: 47.728

7.  The assembly of amyloidogenic yeast sup35 as assessed by scanning (atomic) force microscopy: an analogy to linear colloidal aggregation?

Authors:  S Xu; B Bevis; M F Arnsdorf
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

8.  Stabilization of nucleic acid triplexes by high concentrations of sodium and ammonium salts follows the Hofmeister series.

Authors:  Laurence Lavelle; Jacques R Fresco
Journal:  Biophys Chem       Date:  2003-09       Impact factor: 2.352

9.  Inhibition of amyloid formation by ionic liquids: ionic liquids affecting intermediate oligomers.

Authors:  Hamid Reza Kalhor; Mostafa Kamizi; Jafar Akbari; Akbar Heydari
Journal:  Biomacromolecules       Date:  2009-09-14       Impact factor: 6.988

Review 10.  Propagation of yeast prions.

Authors:  Mick F Tuite; Brian S Cox
Journal:  Nat Rev Mol Cell Biol       Date:  2003-11       Impact factor: 94.444

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  22 in total

1.  Ion-specific effects on prion nucleation and strain formation.

Authors:  Jonathan Rubin; Hasan Khosravi; Kathryn L Bruce; Megan E Lydon; Sven H Behrens; Yury O Chernoff; Andreas S Bommarius
Journal:  J Biol Chem       Date:  2013-08-29       Impact factor: 5.157

2.  Effects of environmental factors on MSP21-25 aggregation indicate the roles of hydrophobic and electrostatic interactions in the aggregation process.

Authors:  Xuecheng Zhang; Yuanqiu Dong; Jigang Yu; Xiaoming Tu
Journal:  Eur Biophys J       Date:  2013-10-23       Impact factor: 1.733

3.  Sulfate anion delays the self-assembly of human insulin by modifying the aggregation pathway.

Authors:  Marta Owczarz; Paolo Arosio
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

4.  True and apparent inhibition of amyloid fibril formation.

Authors:  Pedro M Martins
Journal:  Prion       Date:  2012-12-11       Impact factor: 3.931

5.  Electrostatic effects in filamentous protein aggregation.

Authors:  Alexander K Buell; Peter Hung; Xavier Salvatella; Mark E Welland; Christopher M Dobson; Tuomas P J Knowles
Journal:  Biophys J       Date:  2013-03-05       Impact factor: 4.033

6.  Strain conformation controls the specificity of cross-species prion transmission in the yeast model.

Authors:  Anastasia V Grizel; Aleksandr A Rubel; Yury O Chernoff
Journal:  Prion       Date:  2016-07-03       Impact factor: 3.931

7.  Dynamics of oligomer and amyloid fibril formation by yeast prion Sup35 observed by high-speed atomic force microscopy.

Authors:  Hiroki Konno; Takahiro Watanabe-Nakayama; Takayuki Uchihashi; Momoko Okuda; Liwen Zhu; Noriyuki Kodera; Yousuke Kikuchi; Toshio Ando; Hideki Taguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-25       Impact factor: 11.205

Review 8.  Counting ions and other nucleophiles at surfaces by chemical trapping.

Authors:  Iolanda Midea Cuccovia; Filipe da Silva Lima; Hernan Chaimovich
Journal:  Biophys Rev       Date:  2017-08-29

9.  Ion specific effects: decoupling ion-ion and ion-water interactions.

Authors:  Jinsuk Song; Tae Hui Kang; Mahn Won Kim; Songi Han
Journal:  Phys Chem Chem Phys       Date:  2015-03-11       Impact factor: 3.676

Review 10.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

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