Literature DB >> 19890533

Hydration structures of 2'-deoxyguanosine studied by IR-UV double resonance spectroscopy: comparison with guanosine.

Hiroya Asami1, Shu-hei Urashima, Hiroyuki Saigusa.   

Abstract

Infrared spectra of mono- and dihydrated clusters of 2'-deoxyguanosine (2'-dGs), which are formed by laser desorption combined with supersonic jet-cooling, have been measured by the technique of IR-UV double resonance spectroscopy. The structures of these hydrates are compared with those reported for guanosine (Gs) to elucidate the importance of the 2'-hydroxy group in the hydration. It is shown that monohydrated structures observed for 2'-dGs are similar to those of Gs, indicating no significant influence by the absence of 2'-OH group. For the dihydrated cluster, two structural isomers are identified and assigned to the dihydrates with the guanine moiety is in the keto form, which are consistent with the lowest-energy structures derived from theoretical calculations. Comparison with the results for Gs suggests that the presence of 2'-OH group leads to the stabilization of specific dihydrate structures involving the sugar group.

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Year:  2009        PMID: 19890533     DOI: 10.1039/b912684h

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  1 in total

1.  Semiclassical Vibrational Spectroscopy of Biological Molecules Using Force Fields.

Authors:  Fabio Gabas; Riccardo Conte; Michele Ceotto
Journal:  J Chem Theory Comput       Date:  2020-05-20       Impact factor: 6.006

  1 in total

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