Literature DB >> 19886701

Molecular basis for the electric field modulation of cytochrome C structure and function.

Pablo M De Biase1, Damián Alvarez Paggi, Fabio Doctorovich, Peter Hildebrandt, Dario A Estrin, Daniel H Murgida, Marcelo A Marti.   

Abstract

Cytochrome c (Cyt) is a small soluble heme protein with a hexacoordinated heme and functions as an electron shuttle in the mitochondria and in early events of apoptosis when released to the cytoplasm. Using molecular dynamics simulations, we show here that biologically relevant electric fields induce an increased mobility and structural distortion of key protein segments that leads to the detachment of the sixth axial ligand Met80 from the heme iron. This electric-field-induced conformational transition is energetically and entropically driven and leads to a pentacoordinated high spin heme that is characterized by a drastically lowered reduction potential as well as by an increased peroxidase activity. The simulations provide a detailed atomistic picture of the structural effects of the electric field on the structure of Cyt, which allows a sound interpretation of recent experimental results. The observed conformational change may modulate the electron transfer reactions of Cyt in the mitochondria and, furthermore, may constitute a switch from the redox function in the respiratory chain to the peroxidase function in the early events of apoptosis.

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Year:  2009        PMID: 19886701     DOI: 10.1021/ja906726n

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

1.  Artefacts induced on c-type haem proteins by electrode surfaces.

Authors:  Patrícia M Paes de Sousa; Sofia R Pauleta; M Lurdes Simões Gonçalves; Graham W Pettigrew; Isabel Moura; José J G Moura; Margarida M Correia dos Santos
Journal:  J Biol Inorg Chem       Date:  2010-10-21       Impact factor: 3.358

2.  Oriented electric fields as future smart reagents in chemistry.

Authors:  Sason Shaik; Debasish Mandal; Rajeev Ramanan
Journal:  Nat Chem       Date:  2016-11-22       Impact factor: 24.427

3.  Hydrophobic effect drives oxygen uptake in myoglobin via histidine E7.

Authors:  Leonardo Boechi; Mehrnoosh Arrar; Marcelo A Martí; John S Olson; Adrián E Roitberg; Darío A Estrin
Journal:  J Biol Chem       Date:  2013-01-07       Impact factor: 5.157

4.  Potential-assisted adsorption of bovine serum albumin onto optically transparent carbon electrodes.

Authors:  Tomás E Benavidez; Carlos D Garcia
Journal:  Langmuir       Date:  2013-11-08       Impact factor: 3.882

5.  Removal of H₂O₂ and generation of superoxide radical: role of cytochrome c and NADH.

Authors:  Murugesan Velayutham; Craig Hemann; Jay L Zweier
Journal:  Free Radic Biol Med       Date:  2011-04-13       Impact factor: 7.376

6.  Low-temperature molecular dynamics simulations of horse heart cytochrome c and comparison with inelastic neutron scattering data.

Authors:  Wojciech Pulawski; Slawomir Filipek; Anna Zwolinska; Aleksander Debinski; Krystiana Krzysko; Ramón Garduño-Juárez; Sowmya Viswanathan; Venkatesan Renugopalakrishnan
Journal:  Eur Biophys J       Date:  2012-12-08       Impact factor: 1.733

7.  Electrical unfolding of cytochrome c during translocation through a nanopore constriction.

Authors:  Prabhat Tripathi; Abdelkrim Benabbas; Behzad Mehrafrooz; Hirohito Yamazaki; Aleksei Aksimentiev; Paul M Champion; Meni Wanunu
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-27       Impact factor: 11.205

8.  A nonlinear optical switch induced by an external electric field: inorganic alkaline-earth alkalide.

Authors:  Bo Li; Daoling Peng; Feng Long Gu; Chaoyuan Zhu
Journal:  RSC Adv       Date:  2019-05-29       Impact factor: 4.036

9.  Sulfite Oxidase Activity of Cytochrome c: Role of Hydrogen Peroxide.

Authors:  Murugesan Velayutham; Craig F Hemann; Arturo J Cardounel; Jay L Zweier
Journal:  Biochem Biophys Rep       Date:  2016-03-01
  9 in total

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