Literature DB >> 19883690

Detection of novel swine origin influenza A virus (H1N1) by real-time nucleic acid sequence-based amplification.

Yiyue Ge1, Lunbiao Cui, Xian Qi, Jun Shan, Yunfeng Shan, Yuhua Qi, Bing Wu, Hua Wang, Zhiyang Shi.   

Abstract

Rapid detection of novel swine origin influenza A virus (S-OIV) (H1N1) is crucial for timely implementation of infection control measures. In this study, a haemagglutinin (HA) gene-based real-time nucleic acid sequence-based amplification (NASBA) assay was developed for the specific detection of S-OIV (H1N1). The assay was evaluated and validated by comparing it with existing detection methods for S-OIV (H1N1). Results obtained in a 10-fold dilution series assay demonstrated the analytic sensitivity of the present assay was comparable to that of a commercial S-OIV (H1N1) real-time RT-PCR kit and higher than that of the Centers for Disease Control and Prevention (CDC) TaqMan assay. The actual detection limit of the real-time NASBA assay was approximately 50 copies per reaction. Compared with reference methods (viral culture, conventional RT-PCR, and real-time RT-PCR), the sensitivity, specificity, positive predictive value, and negative predictive value of the present assay were all 100%. Overall, the results showed that the real-time NASBA assay could be used for sensitive and specific detection of S-OIV (H1N1). 2009 Elsevier B.V. All rights reserved.

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Year:  2009        PMID: 19883690     DOI: 10.1016/j.jviromet.2009.10.025

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  11 in total

1.  rapidSTRIPE H1N1 test for detection of the pandemic swine origin influenza A (H1N1) virus.

Authors:  Pranav Patel; Elmara Graser; Stephan Robst; Roger Hillert; Axel Meye; Timo Hillebrand; Matthias Niedrig
Journal:  J Clin Microbiol       Date:  2011-01-19       Impact factor: 5.948

Review 2.  Tools to detect influenza virus.

Authors:  Dae-Ki Kim; Barun Poudel
Journal:  Yonsei Med J       Date:  2013-05-01       Impact factor: 2.759

3.  IFITM3 Clusters on Virus Containing Endosomes and Lysosomes Early in the Influenza A Infection of Human Airway Epithelial Cells.

Authors:  Susann Kummer; Ori Avinoam; Hans-Georg Kräusslich
Journal:  Viruses       Date:  2019-06-12       Impact factor: 5.048

4.  Development of a quantitative real-time nucleic acid sequence-based amplification assay with an internal control using molecular beacon probes for selective and sensitive detection of human rhinovirus serotypes.

Authors:  Francesca Sidoti; Massimiliano Bergallo; Maria Elena Terlizzi; Elsa Piasentin Alessio; Sara Astegiano; Giorgio Gasparini; Rossana Cavallo
Journal:  Mol Biotechnol       Date:  2012-03       Impact factor: 2.695

Review 5.  Alternative molecular tests for virological diagnosis.

Authors:  Francesca Sidoti; Massimiliano Bergallo; Cristina Costa; Rossana Cavallo
Journal:  Mol Biotechnol       Date:  2013-03       Impact factor: 2.695

Review 6.  Diagnostic devices for isothermal nucleic acid amplification.

Authors:  Chia-Chen Chang; Chien-Cheng Chen; Shih-Chung Wei; Hui-Hsin Lu; Yang-Hung Liang; Chii-Wann Lin
Journal:  Sensors (Basel)       Date:  2012-06-14       Impact factor: 3.576

Review 7.  Current Approaches for Diagnosis of Influenza Virus Infections in Humans.

Authors:  Sai Vikram Vemula; Jiangqin Zhao; Jikun Liu; Xue Wang; Santanu Biswas; Indira Hewlett
Journal:  Viruses       Date:  2016-04-12       Impact factor: 5.048

8.  One-step real-time reverse transcription-PCR assays for detecting and subtyping pandemic influenza A/H1N1 2009, seasonal influenza A/H1N1, and seasonal influenza A/H3N2 viruses.

Authors:  Mina Nakauchi; Yoshihiro Yasui; Tatsuya Miyoshi; Hiroko Minagawa; Tomoyuki Tanaka; Masato Tashiro; Tsutomu Kageyama
Journal:  J Virol Methods       Date:  2010-10-26       Impact factor: 2.014

Review 9.  Evolving gene targets and technology in influenza detection.

Authors:  Anthony P Malanoski; Baochuan Lin
Journal:  Mol Diagn Ther       Date:  2013-10       Impact factor: 4.074

Review 10.  Cell Cultures for Virology: Usability, Advantages, and Prospects.

Authors:  Alexander A Dolskiy; Irina V Grishchenko; Dmitry V Yudkin
Journal:  Int J Mol Sci       Date:  2020-10-27       Impact factor: 5.923

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