Literature DB >> 19883663

High local concentration: a fundamental strategy of life.

Stefan Oehler1, Benno Müller-Hill.   

Abstract

Local increase in concentration is a basic principle of transcriptional control. Closer inspection reveals that it is a major force governing all interactions within and between proteins and DNA. Local increase in concentration acts on all levels of organization of living matter. The structures and functions of two central molecules of life-the linear polymers DNA and protein-are particularly illuminating examples. Local increase in concentration leads to cooperative or competitive interactions between molecules. It is an important principle of life. Copyright 2009 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 19883663     DOI: 10.1016/j.jmb.2009.10.056

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  27 in total

1.  Modeling the self-assembly of the cellulosome enzyme complex.

Authors:  Yannick J Bomble; Gregg T Beckham; James F Matthews; Mark R Nimlos; Michael E Himmel; Michael F Crowley
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

Review 2.  DNA curvature and flexibility in vitro and in vivo.

Authors:  Justin P Peters; L James Maher
Journal:  Q Rev Biophys       Date:  2010-05-18       Impact factor: 5.318

3.  Thermodynamic Stability of the Transcription Regulator PaaR2 from Escherichia coli O157:H7.

Authors:  Pieter De Bruyn; San Hadži; Alexandra Vandervelde; Albert Konijnenberg; Maruša Prolič-Kalinšek; Yann G-J Sterckx; Frank Sobott; Jurij Lah; Laurence Van Melderen; Remy Loris
Journal:  Biophys J       Date:  2019-03-28       Impact factor: 4.033

Review 4.  Does the Semiconservative Nature of DNA Replication Facilitate Coherent Phenotypic Diversity?

Authors:  Vic Norris
Journal:  J Bacteriol       Date:  2019-05-22       Impact factor: 3.490

Review 5.  DNA looping in prokaryotes: experimental and theoretical approaches.

Authors:  Axel Cournac; Jacqueline Plumbridge
Journal:  J Bacteriol       Date:  2013-01-04       Impact factor: 3.490

6.  Multiple LacI-mediated loops revealed by Bayesian statistics and tethered particle motion.

Authors:  Stephanie Johnson; Jan-Willem van de Meent; Rob Phillips; Chris H Wiggins; Martin Lindén
Journal:  Nucleic Acids Res       Date:  2014-08-12       Impact factor: 16.971

7.  Epigenomics in 3D: importance of long-range spreading and specific interactions in epigenomic maintenance.

Authors:  Daniel Jost; Cédric Vaillant
Journal:  Nucleic Acids Res       Date:  2018-03-16       Impact factor: 16.971

8.  Quantitative methods for measuring DNA flexibility in vitro and in vivo.

Authors:  Justin P Peters; Nicole A Becker; Emily M Rueter; Zeljko Bajzer; Jason D Kahn; L James Maher
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

9.  Metal-responsive promoter DNA compaction by the ferric uptake regulator.

Authors:  Davide Roncarati; Simone Pelliciari; Nicola Doniselli; Stefano Maggi; Andrea Vannini; Luca Valzania; Luca Mazzei; Barbara Zambelli; Claudio Rivetti; Alberto Danielli
Journal:  Nat Commun       Date:  2016-08-25       Impact factor: 14.919

10.  Bacterial gene control by DNA looping using engineered dimeric transcription activator like effector (TALE) proteins.

Authors:  Nicole A Becker; Tanya L Schwab; Karl J Clark; L James Maher
Journal:  Nucleic Acids Res       Date:  2018-03-16       Impact factor: 16.971

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