Literature DB >> 19875970

Karyotyping, FISH, and PCR in acute lymphoblastic leukemia: competing or complementary diagnostics?

Louise Olde Nordkamp1, Clemens Mellink, Ellen van der Schoot, Henk van den Berg.   

Abstract

BACKGROUND: Chromosomal abnormalities, such as t(9;22)(q34;q11) (ABL/BCR), t(12;21)(p13;q22) (TEL/AML1), and t(11q23) (MLL) are independent prognostic indicators in childhood acute lymphoblastic leukemia resulting in risk adapted therapy. Accurate and rapid detection of these abnormalities is mandatory, which is achieved by karyotyping, fluorescence in situ hybridization, and real time quantitative reverse transcriptase polymerase chain reaction (RQ-PCR). For cost-effective diagnostic approaches knowledge of diagnostic accuracy of these tests is required. Therefore, we aimed to determine the diagnostic accuracy of karyotyping, fluorescence in situ hybridization, and RQ-PCR analysis. PROCEDURE: Retrospective study conducted between January 1, 1992 and January 1, 2007 in the Emma Children Hospital in Amsterdam. All consecutive patients under 18 years with acute lymphoblastic leukaemia were included. Diagnostic tests were performed according to international standards.
RESULTS: Diagnostic techniques show a high-reciprocal agreement and have a high-individual diagnostic accuracy in detecting the above-mentioned chromosomal translocations. However, the sensitivity of karyotyping for detecting the TEL-AML1 fusion gene and the sensitivity of RQ-PCR for detecting MLL-rearrangements was rather low.
CONCLUSIONS: Diagnostic accuracy of tests for detecting t(9;22), t(12;21), and t(11q23) is generally high, although sensitivity is not optimal for all anomalies. Despite the high-diagnostic accuracy, all diagnostic techniques should be used complementary, because any detection of a (significant) chromosomal aberration irrespective of diagnostic mode has to be considered in therapy.

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Year:  2009        PMID: 19875970     DOI: 10.1097/MPH.0b013e3181bc9c85

Source DB:  PubMed          Journal:  J Pediatr Hematol Oncol        ISSN: 1077-4114            Impact factor:   1.289


  10 in total

1.  Clinical utility of FISH analysis in addition to G-banded karyotype in hematologic malignancies and proposal of a practical approach.

Authors:  Won Kyung Kwon; Jin Young Lee; Yeung Chul Mun; Chu Myong Seong; Wha Soon Chung; Jungwon Huh
Journal:  Korean J Hematol       Date:  2010-09-30

2.  Cytogenetic and Molecular Findings in Children with Acute Lymphoblastic Leukemia: Experience of a Single Institution in Argentina.

Authors:  Mariela C Coccé; Cristina N Alonso; Jorge G Rossi; Andrea R Bernasconi; Maria A Rampazzi; Maria S Felice; Patricia L Rubio; Silvia Eandi Eberle; Adriana Medina; Marta S Gallego
Journal:  Mol Syndromol       Date:  2015-10-07

3.  Diagnostic utility of multiprobe fluorescence in situ hybridization assay for detecting cytogenetic aberrations in acute leukemia.

Authors:  Bo-Ram Kim; Jae-Lim Choi; Ji-Eun Kim; Kwang-Sook Woo; Kyeong-Hee Kim; Jeong-Man Kim; Sung-Hyun Kim; Jin-Yeong Han
Journal:  Ann Lab Med       Date:  2014-04-08       Impact factor: 3.464

4.  DNA methylation-based subtype prediction for pediatric acute lymphoblastic leukemia.

Authors:  Mats G Gustafsson; Gudmar Lönnerholm; Erik Forestier; Ann-Christine Syvänen; Jessica Nordlund; Christofer L Bäcklin; Vasilios Zachariadis; Lucia Cavelier; Johan Dahlberg; Ingegerd Öfverholm; Gisela Barbany; Ann Nordgren; Elin Övernäs; Jonas Abrahamsson; Trond Flaegstad; Mats M Heyman; Ólafur G Jónsson; Jukka Kanerva; Rolf Larsson; Josefine Palle; Kjeld Schmiegelow
Journal:  Clin Epigenetics       Date:  2015-02-17       Impact factor: 6.551

5.  High-resolution detection of chromosomal rearrangements in leukemias through mate pair whole genome sequencing.

Authors:  Anh Nhi Tran; Fulya Taylan; Vasilios Zachariadis; Ingegerd Ivanov Öfverholm; Anna Lindstrand; Francesco Vezzi; Britta Lötstedt; Magnus Nordenskjöld; Ann Nordgren; Daniel Nilsson; Gisela Barbany
Journal:  PLoS One       Date:  2018-03-12       Impact factor: 3.240

6.  Deletions in the 17q chromosomal region and their influence on the clonal cytogenetic evolution of recurrent meningiomas.

Authors:  Sina Hemmer; Steffi Urbschat; Joachim Oertel; Ralf Ketter
Journal:  Mol Cytogenet       Date:  2019-05-24       Impact factor: 2.009

7.  Molecular Detection of Fusion Oncogenes in Zambian Patients with Acute Lymphoblastic Leukemia.

Authors:  Pauline Okuku; Geoffrey Kwenda; Mulemba Samutela; Panji Nkhoma; Hamakwa Mantina
Journal:  Int J Appl Basic Med Res       Date:  2020-10-07

8.  Prognostic Value and Outcome for ETV6/RUNX1-Positive Pediatric Acute Lymphoblastic Leukemia: A Report From the South China Children's Leukemia Group.

Authors:  Kun-Yin Qiu; Hong-Gui Xu; Xue-Qun Luo; Hui-Rong Mai; Ning Liao; Li-Hua Yang; Min-Cui Zheng; Wu-Qing Wan; Xue-Dong Wu; Ri-Yang Liu; Qi-Wen Chen; Hui-Qin Chen; Xiao-Fei Sun; Hua Jiang; Xing-Jiang Long; Guo-Hua Chen; Xin-Yu Li; Chang-Gang Li; Li-Bin Huang; Ya-Yun Ling; Dan-Na Lin; Chuan Wen; Wen-Yong Kuang; Xiao-Qin Feng; Zhong-Lv Ye; Bei-Yan Wu; Xiang-Lin He; Qiao-Ru Li; Li-Na Wang; Xian-Ling Kong; Lu-Hong Xu; Chi-Kong Li; Jian-Pei Fang
Journal:  Front Oncol       Date:  2021-12-20       Impact factor: 6.244

9.  Infection of Bacterial Endosymbionts in Insects: A Comparative Study of Two Techniques viz PCR and FISH for Detection and Localization of Symbionts in Whitefly, Bemisia tabaci.

Authors:  Harpreet Singh Raina; Ambika Singh; Sonam Popli; Neeti Pandey; Raman Rajagopal
Journal:  PLoS One       Date:  2015-08-19       Impact factor: 3.240

10.  Detecting Genetic Mosaicism in Cultures of Human Pluripotent Stem Cells.

Authors:  Duncan Baker; Adam J Hirst; Paul J Gokhale; Miguel A Juarez; Steve Williams; Mark Wheeler; Kerry Bean; Thomas F Allison; Harry D Moore; Peter W Andrews; Ivana Barbaric
Journal:  Stem Cell Reports       Date:  2016-11-08       Impact factor: 7.765

  10 in total

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