Literature DB >> 19875121

A numerical model of cellular blebbing: a volume-conserving, fluid-structure interaction model of the entire cell.

Jennifer Young1, Sorin Mitran.   

Abstract

In animal cells, blebs are smooth, quasi-hemispherical protrusions of the plasma membrane that form when a section of the membrane detaches from the underlying actin cytoskeleton and is inflated by flowing cytosol. The mechanics behind this common cellular activity are not yet clear. As a first step in the development of a full computational framework, we present a numerical model of overall cell behavior based upon the interaction between a background Newtonian-fluid cytosol and elastic structures modeling the membrane and filaments. The detailed micromechanics of the cytoskeletal network are the subject of future work. Here, the myosin-driven contraction of the actin network is modeled through stressed elastic filaments. Quantitative models of cytoskeletal micromechanics and biochemistry require accurate estimates of local stress and flow conditions. The main contribution of this paper is the development of a computationally efficient fluid-structure interaction model based on operator splitting, to furnish this data. Cytosol volume conservation (as supported by experimental evidence) is enforced through an intermediate energy minimization step. Realistic bleb formation and retraction is observed from this model, offering an alternative formulation to positing complex continuum behavior of the cytoplasm (e.g. poroelastic model of Charras et al., 2008). Copyright 2009 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 19875121      PMCID: PMC2813352          DOI: 10.1016/j.jbiomech.2009.09.025

Source DB:  PubMed          Journal:  J Biomech        ISSN: 0021-9290            Impact factor:   2.712


  30 in total

1.  F-actin at newly invaginated membrane in neurons: implications for surface area regulation.

Authors:  T L Herring; C S Cohan; E A Welnhofer; L R Mills; C E Morris
Journal:  J Membr Biol       Date:  1999-09-15       Impact factor: 1.843

2.  MECHANICAL PROPERTIES OF THE RED CELL MEMBRANE. I. MEMBRANE STIFFNESS AND INTRACELLULAR PRESSURE.

Authors:  R P RAND; A C BURTON
Journal:  Biophys J       Date:  1964-03       Impact factor: 4.033

3.  Non-equilibration of hydrostatic pressure in blebbing cells.

Authors:  Guillaume T Charras; Justin C Yarrow; Mike A Horton; L Mahadevan; T J Mitchison
Journal:  Nature       Date:  2005-05-19       Impact factor: 49.962

4.  The nonlinear mechanical response of the red blood cell.

Authors:  Young-Zoon Yoon; Jurij Kotar; Gilwon Yoon; Pietro Cicuta
Journal:  Phys Biol       Date:  2008-08-13       Impact factor: 2.583

Review 5.  A short history of blebbing.

Authors:  G T Charras
Journal:  J Microsc       Date:  2008-09       Impact factor: 1.758

6.  Life and times of a cellular bleb.

Authors:  Guillaume T Charras; Margaret Coughlin; Timothy J Mitchison; L Mahadevan
Journal:  Biophys J       Date:  2007-10-05       Impact factor: 4.033

7.  A computational model of ameboid deformation and locomotion.

Authors:  D C Bottino; L J Fauci
Journal:  Eur Biophys J       Date:  1998       Impact factor: 1.733

8.  Protrusive activity, cytoplasmic compartmentalization, and restriction rings in locomoting blebbing Walker carcinosarcoma cells are related to detachment of cortical actin from the plasma membrane.

Authors:  H Keller; P Eggli
Journal:  Cell Motil Cytoskeleton       Date:  1998

Review 9.  Continuous membrane-cytoskeleton adhesion requires continuous accommodation to lipid and cytoskeleton dynamics.

Authors:  Michael P Sheetz; Julia E Sable; Hans-Günther Döbereiner
Journal:  Annu Rev Biophys Biomol Struct       Date:  2006

10.  Reassembly of contractile actin cortex in cell blebs.

Authors:  Guillaume T Charras; Chi-Kuo Hu; Margaret Coughlin; Timothy J Mitchison
Journal:  J Cell Biol       Date:  2006-11-06       Impact factor: 10.539

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  14 in total

1.  A computational model of bleb formation.

Authors:  Wanda Strychalski; Robert D Guy
Journal:  Math Med Biol       Date:  2012-01-31       Impact factor: 1.854

2.  Cellular Blebs and Membrane Invaginations Are Coupled through Membrane Tension Buffering.

Authors:  Ido Lavi; Mohammad Goudarzi; Erez Raz; Nir S Gov; Raphael Voituriez; Pierre Sens
Journal:  Biophys J       Date:  2019-08-09       Impact factor: 4.033

3.  Cell Surface Mechanochemistry and the Determinants of Bleb Formation, Healing, and Travel Velocity.

Authors:  Kathryn Manakova; Huaming Yan; John Lowengrub; Jun Allard
Journal:  Biophys J       Date:  2016-04-12       Impact factor: 4.033

4.  Intracellular Pressure Dynamics in Blebbing Cells.

Authors:  Wanda Strychalski; Robert D Guy
Journal:  Biophys J       Date:  2016-03-08       Impact factor: 4.033

5.  Eukaryotic Cell Dynamics from Crawlers to Swimmers.

Authors:  H G Othmer
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2018-07-19

6.  A POROELASTIC MODEL FOR CELL CRAWLING INCLUDING MECHANICAL COUPLING BETWEEN CYTOSKELETAL CONTRACTION AND ACTIN POLYMERIZATION.

Authors:  L A Taber; Y Shi; L Yang; P V Bayly
Journal:  J Mech Mater Struct       Date:  2011       Impact factor: 1.210

7.  Matrix geometry determines optimal cancer cell migration strategy and modulates response to interventions.

Authors:  Melda Tozluoğlu; Alexander L Tournier; Robert P Jenkins; Steven Hooper; Paul A Bates; Erik Sahai
Journal:  Nat Cell Biol       Date:  2013-06-23       Impact factor: 28.824

Review 8.  Physical view on migration modes.

Authors:  Claudia Tanja Mierke
Journal:  Cell Adh Migr       Date:  2015       Impact factor: 3.405

9.  Continuum modeling of a neuronal cell under blast loading.

Authors:  Antoine Jérusalem; Ming Dao
Journal:  Acta Biomater       Date:  2012-05-02       Impact factor: 8.947

Review 10.  The role and regulation of blebs in cell migration.

Authors:  Ewa K Paluch; Erez Raz
Journal:  Curr Opin Cell Biol       Date:  2013-06-17       Impact factor: 8.382

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