Literature DB >> 19855195

Using LC3 to monitor autophagy flux in the retinal pigment epithelium.

Ai Ling Wang1, Michael E Boulton, William A Dunn, Harripriya Vittal Rao, Jun Cai, Thomas J Lukas, Arthur H Neufeld.   

Abstract

Autophagy is a highly conserved housekeeping pathway that plays a critical role in the removal of aged or damaged intracellular organelles and their delivery to lysosomes for degradation. Autophagy begins with the formation of membranes, arising in part from the endoplasmic reticulum, that elongate and fuse engulfing cytoplasmic constituents into a classic double-membrane bound nascent autophagosome. These early autophagosomes undergo a stepwise maturation process to form the late autophagosome or amphisome that ultimately fuses with a lysosome. Efficient autophagy is dependent on an equilibrium between the formation and elimination of autophagosomes; thus, a deficit in any part of this pathway will cause autophagic dysfunction. Autophagy plays a role in aging and age-related diseases. However, few studies of autophagy in retinal disease have been reported.

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Year:  2009        PMID: 19855195      PMCID: PMC3704326          DOI: 10.4161/auto.5.8.10087

Source DB:  PubMed          Journal:  Autophagy        ISSN: 1554-8627            Impact factor:   16.016


  15 in total

1.  LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.

Authors:  Y Kabeya; N Mizushima; T Ueno; A Yamamoto; T Kirisako; T Noda; E Kominami; Y Ohsumi; T Yoshimori
Journal:  EMBO J       Date:  2000-11-01       Impact factor: 11.598

Review 2.  Autophagy and aging: the importance of maintaining "clean" cells.

Authors:  Ana Maria Cuervo; Ettore Bergamini; Ulf T Brunk; Wulf Dröge; Martine Ffrench; Alexei Terman
Journal:  Autophagy       Date:  2005-10-13       Impact factor: 16.016

3.  WatershedCounting3D: a new method for segmenting and counting punctate structures from confocal image data.

Authors:  Thomas J Gniadek; Graham Warren
Journal:  Traffic       Date:  2007-02-23       Impact factor: 6.215

4.  Dissection of the autophagosome maturation process by a novel reporter protein, tandem fluorescent-tagged LC3.

Authors:  Shunsuke Kimura; Takeshi Noda; Tamotsu Yoshimori
Journal:  Autophagy       Date:  2007-05-21       Impact factor: 16.016

Review 5.  Autophagy: from phenomenology to molecular understanding in less than a decade.

Authors:  Daniel J Klionsky
Journal:  Nat Rev Mol Cell Biol       Date:  2007-11       Impact factor: 94.444

6.  Retinitis pigmentosa: a preliminary report on tissue culture studies of retinal pigment epithelial cells from eight affected human eyes.

Authors:  M E Boulton; J Marshall; J Mellerio
Journal:  Exp Eye Res       Date:  1983-09       Impact factor: 3.467

Review 7.  Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes.

Authors:  Daniel J Klionsky; Hagai Abeliovich; Patrizia Agostinis; Devendra K Agrawal; Gjumrakch Aliev; David S Askew; Misuzu Baba; Eric H Baehrecke; Ben A Bahr; Andrea Ballabio; Bruce A Bamber; Diane C Bassham; Ettore Bergamini; Xiaoning Bi; Martine Biard-Piechaczyk; Janice S Blum; Dale E Bredesen; Jeffrey L Brodsky; John H Brumell; Ulf T Brunk; Wilfried Bursch; Nadine Camougrand; Eduardo Cebollero; Francesco Cecconi; Yingyu Chen; Lih-Shen Chin; Augustine Choi; Charleen T Chu; Jongkyeong Chung; Peter G H Clarke; Robert S B Clark; Steven G Clarke; Corinne Clavé; John L Cleveland; Patrice Codogno; María I Colombo; Ana Coto-Montes; James M Cregg; Ana Maria Cuervo; Jayanta Debnath; Francesca Demarchi; Patrick B Dennis; Phillip A Dennis; Vojo Deretic; Rodney J Devenish; Federica Di Sano; J Fred Dice; Marian Difiglia; Savithramma Dinesh-Kumar; Clark W Distelhorst; Mojgan Djavaheri-Mergny; Frank C Dorsey; Wulf Dröge; Michel Dron; William A Dunn; Michael Duszenko; N Tony Eissa; Zvulun Elazar; Audrey Esclatine; Eeva-Liisa Eskelinen; László Fésüs; Kim D Finley; José M Fuentes; Juan Fueyo; Kozo Fujisaki; Brigitte Galliot; Fen-Biao Gao; David A Gewirtz; Spencer B Gibson; Antje Gohla; Alfred L Goldberg; Ramon Gonzalez; Cristina González-Estévez; Sharon Gorski; Roberta A Gottlieb; Dieter Häussinger; You-Wen He; Kim Heidenreich; Joseph A Hill; Maria Høyer-Hansen; Xun Hu; Wei-Pang Huang; Akiko Iwasaki; Marja Jäättelä; William T Jackson; Xuejun Jiang; Shengkan Jin; Terje Johansen; Jae U Jung; Motoni Kadowaki; Chanhee Kang; Ameeta Kelekar; David H Kessel; Jan A K W Kiel; Hong Pyo Kim; Adi Kimchi; Timothy J Kinsella; Kirill Kiselyov; Katsuhiko Kitamoto; Erwin Knecht; Masaaki Komatsu; Eiki Kominami; Seiji Kondo; Attila L Kovács; Guido Kroemer; Chia-Yi Kuan; Rakesh Kumar; Mondira Kundu; Jacques Landry; Marianne Laporte; Weidong Le; Huan-Yao Lei; Michael J Lenardo; Beth Levine; Andrew Lieberman; Kah-Leong Lim; Fu-Cheng Lin; Willisa Liou; Leroy F Liu; Gabriel Lopez-Berestein; Carlos López-Otín; Bo Lu; Kay F Macleod; Walter Malorni; Wim Martinet; Ken Matsuoka; Josef Mautner; Alfred J Meijer; Alicia Meléndez; Paul Michels; Giovanni Miotto; Wilhelm P Mistiaen; Noboru Mizushima; Baharia Mograbi; Iryna Monastyrska; Michael N Moore; Paula I Moreira; Yuji Moriyasu; Tomasz Motyl; Christian Münz; Leon O Murphy; Naweed I Naqvi; Thomas P Neufeld; Ichizo Nishino; Ralph A Nixon; Takeshi Noda; Bernd Nürnberg; Michinaga Ogawa; Nancy L Oleinick; Laura J Olsen; Bulent Ozpolat; Shoshana Paglin; Glen E Palmer; Issidora Papassideri; Miles Parkes; David H Perlmutter; George Perry; Mauro Piacentini; Ronit Pinkas-Kramarski; Mark Prescott; Tassula Proikas-Cezanne; Nina Raben; Abdelhaq Rami; Fulvio Reggiori; Bärbel Rohrer; David C Rubinsztein; Kevin M Ryan; Junichi Sadoshima; Hiroshi Sakagami; Yasuyoshi Sakai; Marco Sandri; Chihiro Sasakawa; Miklós Sass; Claudio Schneider; Per O Seglen; Oleksandr Seleverstov; Jeffrey Settleman; John J Shacka; Irving M Shapiro; Andrei Sibirny; Elaine C M Silva-Zacarin; Hans-Uwe Simon; Cristiano Simone; Anne Simonsen; Mark A Smith; Katharina Spanel-Borowski; Vickram Srinivas; Meredith Steeves; Harald Stenmark; Per E Stromhaug; Carlos S Subauste; Seiichiro Sugimoto; David Sulzer; Toshihiko Suzuki; Michele S Swanson; Ira Tabas; Fumihiko Takeshita; Nicholas J Talbot; Zsolt Tallóczy; Keiji Tanaka; Kozo Tanaka; Isei Tanida; Graham S Taylor; J Paul Taylor; Alexei Terman; Gianluca Tettamanti; Craig B Thompson; Michael Thumm; Aviva M Tolkovsky; Sharon A Tooze; Ray Truant; Lesya V Tumanovska; Yasuo Uchiyama; Takashi Ueno; Néstor L Uzcátegui; Ida van der Klei; Eva C Vaquero; Tibor Vellai; Michael W Vogel; Hong-Gang Wang; Paul Webster; John W Wiley; Zhijun Xi; Gutian Xiao; Joachim Yahalom; Jin-Ming Yang; George Yap; Xiao-Ming Yin; Tamotsu Yoshimori; Li Yu; Zhenyu Yue; Michisuke Yuzaki; Olga Zabirnyk; Xiaoxiang Zheng; Xiongwei Zhu; Russell L Deter
Journal:  Autophagy       Date:  2007-11-21       Impact factor: 16.016

8.  In search of an "autophagomometer".

Authors:  David C Rubinsztein; Ana Maria Cuervo; Brinda Ravikumar; Sovan Sarkar; Viktor Korolchuk; Susmita Kaushik; Daniel J Klionsky
Journal:  Autophagy       Date:  2009-07-23       Impact factor: 16.016

Review 9.  Potential therapeutic applications of autophagy.

Authors:  David C Rubinsztein; Jason E Gestwicki; Leon O Murphy; Daniel J Klionsky
Journal:  Nat Rev Drug Discov       Date:  2007-04       Impact factor: 84.694

Review 10.  LC3 conjugation system in mammalian autophagy.

Authors:  Isei Tanida; Takashi Ueno; Eiki Kominami
Journal:  Int J Biochem Cell Biol       Date:  2004-12       Impact factor: 5.085

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  23 in total

1.  Autophagy control by the VEGF-C/NRP-2 axis in cancer and its implication for treatment resistance.

Authors:  Marissa J Stanton; Samikshan Dutta; Heyu Zhang; Navatha S Polavaram; Alexey A Leontovich; Pia Hönscheid; Frank A Sinicrope; Donald J Tindall; Michael H Muders; Kaustubh Datta
Journal:  Cancer Res       Date:  2012-11-13       Impact factor: 12.701

Review 2.  Autophagy in the retina: a potential role in age-related macular degeneration.

Authors:  Sayak K Mitter; Haripriya Vittal Rao; Xiaoping Qi; Jun Cai; Andrew Sugrue; William A Dunn; Maria B Grant; Michael E Boulton
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

3.  Pigmented and albino rats differ in their responses to moderate, acute and reversible intraocular pressure elevation.

Authors:  Akshay Gurdita; Bingyao Tan; Karen M Joos; Kostadinka Bizheva; Vivian Choh
Journal:  Doc Ophthalmol       Date:  2017-04-07       Impact factor: 2.379

4.  Synthesis, characterization and antitumor mechanism investigation of ruthenium(II) polypyridyl complexes with artesunate moiety.

Authors:  Bi-Chun Chen; Jun-Jian Lu; Ning Jiang; Xiu-Rong Ma; Rong-Tao Li; Rui-Rong Ye
Journal:  J Biol Inorg Chem       Date:  2021-09-20       Impact factor: 3.358

Review 5.  Autophagy in the eye: implications for ocular cell health.

Authors:  Laura S Frost; Claire H Mitchell; Kathleen Boesze-Battaglia
Journal:  Exp Eye Res       Date:  2014-05-06       Impact factor: 3.467

6.  Dysregulated autophagy in the RPE is associated with increased susceptibility to oxidative stress and AMD.

Authors:  Sayak K Mitter; Chunjuan Song; Xiaoping Qi; Haoyu Mao; Haripriya Rao; Debra Akin; Alfred Lewin; Maria Grant; William Dunn; Jindong Ding; Catherine Bowes Rickman; Michael Boulton
Journal:  Autophagy       Date:  2014       Impact factor: 16.016

7.  Noncanonical autophagy promotes the visual cycle.

Authors:  Ji-Young Kim; Hui Zhao; Jennifer Martinez; Teresa Ann Doggett; Alexander V Kolesnikov; Peter H Tang; Zsolt Ablonczy; Chi-Chao Chan; Zhenqing Zhou; Douglas R Green; Thomas A Ferguson
Journal:  Cell       Date:  2013-07-18       Impact factor: 41.582

Review 8.  Mitochondrial quality control in AMD: does mitophagy play a pivotal role?

Authors:  Juha M T Hyttinen; Johanna Viiri; Kai Kaarniranta; Janusz Błasiak
Journal:  Cell Mol Life Sci       Date:  2018-05-18       Impact factor: 9.261

9.  The role of autophagy in Parkinson's disease: rotenone-based modeling.

Authors:  Nian Xiong; Jing Xiong; Min Jia; Ling Liu; Xiaowei Zhang; Zhenzhen Chen; Jinsha Huang; Zhentao Zhang; Lingling Hou; Zhijian Luo; Devina Ghoorah; Zhicheng Lin; Tao Wang
Journal:  Behav Brain Funct       Date:  2013-03-15       Impact factor: 3.759

10.  Three isoforms of the Atg16L1 protein contribute different autophagic properties.

Authors:  Tao Jiang; Beibei Qin; Jianqin He; Shuangyan Lin; Shiping Ding
Journal:  Mol Cell Biochem       Date:  2013-03-20       Impact factor: 3.396

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