Literature DB >> 19852932

An efficient gene-disruption method in Cryptococcus neoformans by double-joint PCR with NAT-split markers.

Min Su Kim1, Seo-Young Kim, Ja Kyung Yoon, Yin-Won Lee, Yong-Sun Bahn.   

Abstract

Targeted gene disruption via biolistic transformation and homologous recombination is a method widely used to identify and investigate the function of genes in Cryptococcus neoformans that causes fatal fungal meningitis if not timely treated. Currently, most laboratories employ the overlap-PCR method to generate a gene-disruption cassette with dominant selectable markers, such as nourseothricin acetyltransferase (NAT). However, the conventional overlap-PCR method is often found to be inefficient because of the presence of multiple templates and of the long length of the final overlap-PCR products. In this report, we suggested an efficient gene-disruption method for C. neoformans, termed a double-joint PCR with NAT-split markers. Here we demonstrated that the gene-disruption cassette generated using double-joint PCR with NAT-split markers can be used successfully for targeted C. neoformans gene disruption with the advantages of providing a more convenient construction of gene-disruption cassettes and high targeted-integration frequency.

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Year:  2009        PMID: 19852932     DOI: 10.1016/j.bbrc.2009.10.089

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  49 in total

1.  Sterylglucoside catabolism in Cryptococcus neoformans with endoglycoceramidase-related protein 2 (EGCrP2), the first steryl-β-glucosidase identified in fungi.

Authors:  Takashi Watanabe; Tomoharu Ito; Hatsumi M Goda; Yohei Ishibashi; Tomofumi Miyamoto; Kazutaka Ikeda; Ryo Taguchi; Nozomu Okino; Makoto Ito
Journal:  J Biol Chem       Date:  2014-10-31       Impact factor: 5.157

2.  Quality control of fungus-specific glucosylceramide in Cryptococcus neoformans by endoglycoceramidase-related protein 1 (EGCrP1).

Authors:  Yohei Ishibashi; Kazutaka Ikeda; Keishi Sakaguchi; Nozomu Okino; Ryo Taguchi; Makoto Ito
Journal:  J Biol Chem       Date:  2011-11-09       Impact factor: 5.157

3.  Sulphiredoxin plays peroxiredoxin-dependent and -independent roles via the HOG signalling pathway in Cryptococcus neoformans and contributes to fungal virulence.

Authors:  Rajendra Upadhya; Hyelim Kim; Kwang-Woo Jung; Goun Park; Woei Lam; Jennifer K Lodge; Yong-Sun Bahn
Journal:  Mol Microbiol       Date:  2013-10-03       Impact factor: 3.501

4.  Ste50 adaptor protein governs sexual differentiation of Cryptococcus neoformans via the pheromone-response MAPK signaling pathway.

Authors:  Kwang-Woo Jung; Seo-Young Kim; Laura H Okagaki; Kirsten Nielsen; Yong-Sun Bahn
Journal:  Fungal Genet Biol       Date:  2010-10-28       Impact factor: 3.495

5.  Identifying a novel connection between the fungal plasma membrane and pH-sensing.

Authors:  Hannah E Brown; Kyla S Ost; Shannon K Esher; Kaila M Pianalto; Joseph W Saelens; Ziqiang Guan; J Andrew Alspaugh
Journal:  Mol Microbiol       Date:  2018-09-09       Impact factor: 3.501

6.  The TOR Pathway Plays Pleiotropic Roles in Growth and Stress Responses of the Fungal Pathogen Cryptococcus neoformans.

Authors:  Yee-Seul So; Dong-Gi Lee; Alexander Idnurm; Giuseppe Ianiri; Yong-Sun Bahn
Journal:  Genetics       Date:  2019-06-07       Impact factor: 4.562

7.  An efficient gene disruption method using a positive-negative split-selection marker and Agrobacterium tumefaciens-mediated transformation for Nomuraea rileyi.

Authors:  Yu Su; Zhongkang Wang; Changwen Shao; Yuanli Luo; Li Wang; Youping Yin
Journal:  World J Microbiol Biotechnol       Date:  2018-01-16       Impact factor: 3.312

8.  Unraveling unique structure and biosynthesis pathway of N-linked glycans in human fungal pathogen Cryptococcus neoformans by glycomics analysis.

Authors:  Jeong-Nam Park; Dong-Jik Lee; Ohsuk Kwon; Doo-Byoung Oh; Yong-Sun Bahn; Hyun Ah Kang
Journal:  J Biol Chem       Date:  2012-04-12       Impact factor: 5.157

9.  The transcriptional response of Cryptococcus neoformans to ingestion by Acanthamoeba castellanii and macrophages provides insights into the evolutionary adaptation to the mammalian host.

Authors:  Lorena da S Derengowski; Hugo Costa Paes; Patrícia Albuquerque; Aldo Henrique F P Tavares; Larissa Fernandes; Ildinete Silva-Pereira; Arturo Casadevall
Journal:  Eukaryot Cell       Date:  2013-03-22

10.  Comparative transcriptome analysis reveals novel roles of the Ras and cyclic AMP signaling pathways in environmental stress response and antifungal drug sensitivity in Cryptococcus neoformans.

Authors:  Shinae Maeng; Young-Joon Ko; Gyu-Bum Kim; Kwang-Woo Jung; Anna Floyd; Joseph Heitman; Yong-Sun Bahn
Journal:  Eukaryot Cell       Date:  2010-01-22
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