Literature DB >> 19851724

Paenibacillus pinihumi sp. nov., a cellulolytic bacterium isolated from the rhizosphere of Pinus densiflora.

Byung-Chun Kim1, Kang Hyun Lee, Mi Na Kim, Eun-Mi Kim, Moon-Soo Rhee, O-Yu Kwon, Kee-Sun Shin.   

Abstract

A novel cellulolytic bacterium, strain S23(T), was isolated from the rhizosphere of the pine trees in Daejeon, Republic of Korea. This isolate was Gram-positive, strictly aerobic, rod-shaped, catalase-negative, oxidase-positive, motile by means of peritrichous flagella, and tested positive for alkaline phosphatase, esterase lipase, leucine arylamidase, alpha-galactosidase, and beta-galactosidase activities. The DNA G+C content was 49.5 mol%. The main cellular fatty acids were anteiso-C(15:0) (51.9%), iso-C(16:0) (14.7%), and iso-C(15:0) (13.2%). The major isoprenoid quinone was menaquinone 7 (MK-7). Diagnostic diamino acid in the cell-wall pepti-doglycan was meso-diaminopimelic acid. Comparative 16S rRNA gene sequence analysis showed that this strain clustered with Paenibacillus species. The 16S rRNA gene sequence similarity values between S23(T) and other Paenibacillus species were between 89.9% and 95.9%, and S23(T) was most closely related to Paenibacillus tarimensis SA-7-6(T). On the basis of phylogenetic and phenotypic properties of strain S23(T), the isolate is considered as a novel species belonging to the genus Paenibacillus. Therefore, the name, Paenibacillus pinihumi sp. nov., is proposed for the rhizosphere isolate; the type strain is S23(T) (=KCTC 13695(T) =KACC 14199(T) =JCM 16419(T)).

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Year:  2009        PMID: 19851724     DOI: 10.1007/s12275-009-0270-z

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  22 in total

1.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

2.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

3.  List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet.

Authors:  J P Euzéby
Journal:  Int J Syst Bacteriol       Date:  1997-04

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Paenibacillus phyllosphaerae sp. nov., a xylanolytic bacterium isolated from the phyllosphere of Phoenix dactylifera.

Authors:  Raúl Rivas; Pedro F Mateos; Eustoquio Martínez-Molina; Encarna Velázquez
Journal:  Int J Syst Evol Microbiol       Date:  2005-03       Impact factor: 2.747

7.  Paenibacillus pasadenensis sp. nov. and Paenibacillus barengoltzii sp. nov., isolated from a spacecraft assembly facility.

Authors:  Shariff Osman; Masataka Satomi; Kasthuri Venkateswaran
Journal:  Int J Syst Evol Microbiol       Date:  2006-07       Impact factor: 2.747

8.  Paenibacillus curdlanolyticus strain B-6 xylanolytic-cellulolytic enzyme system that degrades insoluble polysaccharides.

Authors:  Patthra Pason; Khin Lay Kyu; Khanok Ratanakhanokchai
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

9.  Paenibacillus cellulosilyticus sp. nov., a cellulolytic and xylanolytic bacterium isolated from the bract phyllosphere of Phoenix dactylifera.

Authors:  Raúl Rivas; Paula García-Fraile; Pedro F Mateos; Eustoquio Martínez-Molina; Encarna Velázquez
Journal:  Int J Syst Evol Microbiol       Date:  2006-12       Impact factor: 2.747

10.  Paenibacillus glycanilyticus sp. nov., a novel species that degrades heteropolysaccharide produced by the cyanobacterium Nostoc commune.

Authors:  Shin'ichiro Kajiyama; Hiroko Kawasaki; Masahiro Yagi; Tatsuji Seki; Ei-ichiro Fukusaki; Akio Kobayashi
Journal:  Int J Syst Evol Microbiol       Date:  2002-09       Impact factor: 2.747

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  6 in total

1.  Paenibacillus roseus sp. nov., a ginsenoside-transforming bacterium isolated from forest soil.

Authors:  Shahina Akter; Xiaoqing Wang; Sun-Young Lee; M Mizanur Rahman; Jong-Hyun Park; Muhammad Zubair Siddiqi; Sri Renukadevi Balusamy; Kihong Nam; Md Shahedur Rahman; Md Amdadul Huq
Journal:  Arch Microbiol       Date:  2021-05-25       Impact factor: 2.552

2.  Identification and characterization of psychrotolerant sporeformers associated with fluid milk production and processing.

Authors:  Reid A Ivy; Matthew L Ranieri; Nicole H Martin; Henk C den Bakker; Bruno M Xavier; Martin Wiedmann; Kathryn J Boor
Journal:  Appl Environ Microbiol       Date:  2012-01-13       Impact factor: 4.792

3.  Paenibacillus xylaniclasticus sp. nov., a xylanolytic-cellulolytic bacterium isolated from sludge in an anaerobic digester.

Authors:  Chakrit Tachaapaikoon; Somboon Tanasupawat; Patthra Pason; Somphit Sornyotha; Rattiya Waeonukul; Khin Lay Kyu; Khanok Ratanakhanokchai
Journal:  J Microbiol       Date:  2012-06-30       Impact factor: 3.422

4.  Paenibacillus allorhizoplanae sp. nov. from the rhizoplane of a Zea mays root.

Authors:  Peter Kämpfer; André Lipski; Lucie Lamothe; Dominique Clermont; Alexis Criscuolo; John A McInroy; Stefanie P Glaeser
Journal:  Arch Microbiol       Date:  2022-09-18       Impact factor: 2.667

5.  Cellulolytic potential of a novel strain of Paenibacillus sp. isolated from the armored catfish Parotocinclus maculicauda gut.

Authors:  André L M de Castro; Renata E Vollú; Raquel S Peixoto; André L Grigorevski-Lima; Rosalie R R Coelho; Elba P S Bon; Alexandre S Rosado; Lucy Seldin
Journal:  Braz J Microbiol       Date:  2011-12-01       Impact factor: 2.476

6.  Genome-based comparative analyses of Antarctic and temperate species of Paenibacillus.

Authors:  Melissa Dsouza; Michael W Taylor; Susan J Turner; Jackie Aislabie
Journal:  PLoS One       Date:  2014-10-06       Impact factor: 3.240

  6 in total

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