Literature DB >> 19850368

Monoallelic expression and tissue specificity are associated with high crossover rates.

Anamaria Necsulea1, Marie Sémon, Laurent Duret, Laurence D Hurst.   

Abstract

What determines the recombination rate of a gene? Following the observation that, in humans, imprinted genes have unusually high recombination levels, we ask whether increased recombination is seen for other monoallelically expressed genes and, more generally, how transcriptional properties relate to recombination. We find that monoallelically expressed genes do have high crossover rates and discover a striking negative correlation between within-gene crossover rate and expression breadth. We hypothesise that these findings are possibly symptomatic of a more general, adverse relationship between recombination and transcription in the human genome.

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Year:  2009        PMID: 19850368     DOI: 10.1016/j.tig.2009.10.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  12 in total

1.  Genomic signatures of germline gene expression.

Authors:  Graham McVicker; Phil Green
Journal:  Genome Res       Date:  2010-08-04       Impact factor: 9.043

2.  Intronic AT skew is a defendable proxy for germline transcription but does not predict crossing-over or protein evolution rates in Drosophila melanogaster.

Authors:  Claudia C Weber; Laurence D Hurst
Journal:  J Mol Evol       Date:  2010-10-12       Impact factor: 2.395

3.  Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome.

Authors:  Erik Axelsson; Matthew T Webster; Abhirami Ratnakumar; Chris P Ponting; Kerstin Lindblad-Toh
Journal:  Genome Res       Date:  2011-10-17       Impact factor: 9.043

4.  Evolution of vertebrate tissues driven by differential modes of gene duplication.

Authors:  Masanobu Satake; Masakado Kawata; Aoife McLysaght; Takashi Makino
Journal:  DNA Res       Date:  2012-04-05       Impact factor: 4.458

5.  The characterisation of three types of genes that overlie copy number variable regions.

Authors:  Cara Woodwark; Alex Bateman
Journal:  PLoS One       Date:  2011-05-26       Impact factor: 3.240

6.  Late replicating domains are highly recombining in females but have low male recombination rates: implications for isochore evolution.

Authors:  Catherine J Pink; Laurence D Hurst
Journal:  PLoS One       Date:  2011-09-20       Impact factor: 3.240

7.  Support for multiple classes of local expression clusters in Drosophila melanogaster, but no evidence for gene order conservation.

Authors:  Claudia C Weber; Laurence D Hurst
Journal:  Genome Biol       Date:  2011-03-17       Impact factor: 13.583

8.  Highly variable recombinational landscape modulates efficacy of natural selection in birds.

Authors:  Toni I Gossmann; Anna W Santure; Ben C Sheldon; Jon Slate; Kai Zeng
Journal:  Genome Biol Evol       Date:  2014-08       Impact factor: 3.416

9.  Causes and consequences of crossing-over evidenced via a high-resolution recombinational landscape of the honey bee.

Authors:  Haoxuan Liu; Xiaohui Zhang; Ju Huang; Jian-Qun Chen; Dacheng Tian; Laurence D Hurst; Sihai Yang
Journal:  Genome Biol       Date:  2015-01-02       Impact factor: 13.583

10.  Unraveling patterns of site-to-site synonymous rates variation and associated gene properties of protein domains and families.

Authors:  Slavica Dimitrieva; Maria Anisimova
Journal:  PLoS One       Date:  2014-06-04       Impact factor: 3.240

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