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Literature DB >> 19846782

Peeling back the mystery of DNA overstretching.

Mark C Williams¹, Ioulia Rouzina, Micah J McCauley.

Abstract

Mesh：

Substances：
DNA

Year: 2009 PMID： 19846782 PMCID： PMC2775292 DOI： 10.1073/pnas.0910269106

Source DB: PubMed Journal: Proc Natl Acad Sci U S A ISSN： 0027-8424 Impact factor: 11.205

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18 in total

1. Force-induced melting of the DNA double helix 1. Thermodynamic analysis.

Authors: I Rouzina; V A Bloomfield
Journal: Biophys J Date: 2001-02 Impact factor: 4.033

2. Force-induced melting of the DNA double helix. 2. Effect of solution conditions.

Authors: I Rouzina; V A Bloomfield
Journal: Biophys J Date: 2001-02 Impact factor: 4.033

3. Theory of high-force DNA stretching and overstretching.

Authors: C Storm; P C Nelson
Journal: Phys Rev E Stat Nonlin Soft Matter Phys Date: 2003-05-09

Review 4. Ten years of tension: single-molecule DNA mechanics.

Authors: Carlos Bustamante; Zev Bryant; Steven B Smith
Journal: Nature Date: 2003-01-23 Impact factor: 49.962

5. Overstretching and force-driven strand separation of double-helix DNA.

Authors: Simona Cocco; Jie Yan; Jean-Francois Léger; Didier Chatenay; John F Marko
Journal: Phys Rev E Stat Nonlin Soft Matter Phys Date: 2004-07-20

6. There and (slowly) back again: entropy-driven hysteresis in a model of DNA overstretching.

Authors: Stephen Whitelam; Sander Pronk; Phillip L Geissler
Journal: Biophys J Date: 2007-11-02 Impact factor: 4.033

7. DNA: an extensible molecule.

Authors: P Cluzel; A Lebrun; C Heller; R Lavery; J L Viovy; D Chatenay; F Caron
Journal: Science Date: 1996-02-09 Impact factor: 47.728

8. Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules.

Authors: S B Smith; Y Cui; C Bustamante
Journal: Science Date: 1996-02-09 Impact factor: 47.728

9. Modelling extreme stretching of DNA.

Authors: A Lebrun; R Lavery
Journal: Nucleic Acids Res Date: 1996-06-15 Impact factor: 16.971

10. Sequence-dependent mechanics of single DNA molecules.

Authors: M Rief; H Clausen-Schaumann; H E Gaub
Journal: Nat Struct Biol Date: 1999-04

13 in total

1. Two distinct overstretched DNA structures revealed by single-molecule thermodynamics measurements.

Authors: Xinghua Zhang; Hu Chen; Hongxia Fu; Patrick S Doyle; Jie Yan
Journal: Proc Natl Acad Sci U S A Date: 2012-04-24 Impact factor: 11.205

Review 2. Single-molecule stretching studies of RNA chaperones.

Authors: Hao Wu; Ioulia Rouzina; Mark C Williams
Journal: RNA Biol Date: 2010-11-01 Impact factor: 4.652

Review 3. Role of HIV-1 nucleocapsid protein in HIV-1 reverse transcription.

Authors: Judith G Levin; Mithun Mitra; Anjali Mascarenhas; Karin Musier-Forsyth
Journal: RNA Biol Date: 2010-11-01 Impact factor: 4.652

4. PicoNewton-millisecond force steps reveal the transition kinetics and mechanism of the double-stranded DNA elongation.

Authors: Pasquale Bianco; Lorenzo Bongini; Luca Melli; Mario Dolfi; Vincenzo Lombardi
Journal: Biophys J Date: 2011-08-17 Impact factor: 4.033

5. Direct observation method of individual single-stranded DNA molecules using fluorescent replication protein A.

Authors: Masahiko Oshige; Shohei Kawasaki; Hiroki Takano; Kouji Yamaguchi; Hirofumi Kurita; Takeshi Mizuno; Shun-ichi Matsuura; Akira Mizuno; Shinji Katsura
Journal: J Fluoresc Date: 2011-01-12 Impact factor: 2.217

Review 6. Biophysical characterization of DNA binding from single molecule force measurements.

Authors: Kathy R Chaurasiya; Thayaparan Paramanathan; Micah J McCauley; Mark C Williams
Journal: Phys Life Rev Date: 2010-06-04 Impact factor: 11.025

7. Fundamental differences between the nucleic acid chaperone activities of HIV-1 nucleocapsid protein and Gag or Gag-derived proteins: biological implications.

Authors: Tiyun Wu; Siddhartha A K Datta; Mithun Mitra; Robert J Gorelick; Alan Rein; Judith G Levin
Journal: Virology Date: 2010-07-23 Impact factor: 3.616