Literature DB >> 19842712

Reconstitution of Gloeobacter violaceus rhodopsin with a light-harvesting carotenoid antenna.

Eleonora S Imasheva1, Sergei P Balashov, Ah Reum Choi, Kwang-Hwan Jung, Janos K Lanyi.   

Abstract

We show that salinixanthin, the light-harvesting carotenoid antenna of xanthorhodopsin, can be reconstituted into the retinal protein from Gloeobacter violaceus expressed in Escherichia coli. Reconstitution of gloeobacter rhodopsin with the carotenoid is accompanied by characteristic absorption changes and the appearance of CD bands similar to those observed for xanthorhodopsin that indicate immobilization and twist of the carotenoid in the binding site. As in xanthorhodopsin, the carotenoid functions as a light-harvesting antenna. The excitation spectrum for retinal fluorescence emission shows that ca. 36% of the energy absorbed by the carotenoid is transferred to the retinal. From excitation anisotropy, we calculate the angle between the two chromophores as being ca. 50 degrees , similar to that in xanthorhodopsin. The results indicate that gloeobacter rhodopsin binds salinixanthin in a manner similar to that of xanthorhodopsin and suggest that it might bind a carotenoid also in vivo. In the crystallographic structure of xanthorhodopsin, the conjugated chain of the carotenoid lies on the surface of helices E and F, and the 4-keto ring is immersed in the protein at van der Waals distance from the ionone ring of the retinal. The 4-keto ring is in the space occupied by a tryptophan in bacteriorhodopsin, which is replaced by the smaller glycine in xanthorhodopsin and gloeobacter rhodopsin. Specific binding of the carotenoid and its light-harvesting function are eliminated by a single mutation of the gloeobacter protein that replaces this glycine with a tryptophan. This indicates that the 4-keto ring is critically involved in carotenoid binding and suggests that a number of other recently identified retinal proteins, from a diverse group of organisms, could also contain carotenoid antenna since they carry the homologous glycine near the retinal.

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Year:  2009        PMID: 19842712      PMCID: PMC2795404          DOI: 10.1021/bi901552x

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  47 in total

1.  Proteorhodopsin phototrophy in the ocean.

Authors:  O Béjà; E N Spudich; J L Spudich; M Leclerc; E F DeLong
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

2.  Proton transfers in the photochemical reaction cycle of proteorhodopsin.

Authors:  Andrei K Dioumaev; Leonid S Brown; Jennifer Shih; Elena N Spudich; John L Spudich; Janos K Lanyi
Journal:  Biochemistry       Date:  2002-04-30       Impact factor: 3.162

3.  New insights into the evolutionary history of type 1 rhodopsins.

Authors:  Mario X Ruiz-González; Ignacio Marín
Journal:  J Mol Evol       Date:  2004-03       Impact factor: 2.395

4.  pH-dependent transitions in xanthorhodopsin.

Authors:  Eleonora S Imasheva; Sergei P Balashov; Jennifer M Wang; Janos K Lanyi
Journal:  Photochem Photobiol       Date:  2006 Nov-Dec       Impact factor: 3.421

5.  Chromophore interaction in xanthorhodopsin--retinal dependence of salinixanthin binding.

Authors:  Eleonora S Imasheva; Sergei P Balashov; Jennifer M Wang; Elena Smolensky; Mordechai Sheves; Janos K Lanyi
Journal:  Photochem Photobiol       Date:  2008-04-09       Impact factor: 3.421

6.  Australian Halobacteria and their retinal-protein ion pumps.

Authors:  Y Mukohata; K Ihara; K Uegaki; Y Miyashita; Y Sugiyama
Journal:  Photochem Photobiol       Date:  1991-12       Impact factor: 3.421

7.  Xanthorhodopsin: a proton pump with a light-harvesting carotenoid antenna.

Authors:  Sergei P Balashov; Eleonora S Imasheva; Vladimir A Boichenko; Josefa Antón; Jennifer M Wang; Janos K Lanyi
Journal:  Science       Date:  2005-09-23       Impact factor: 47.728

8.  The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea.

Authors:  E F Mongodin; K E Nelson; S Daugherty; R T Deboy; J Wister; H Khouri; J Weidman; D A Walsh; R T Papke; G Sanchez Perez; A K Sharma; C L Nesbø; D MacLeod; E Bapteste; W F Doolittle; R L Charlebois; B Legault; F Rodriguez-Valera
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-05       Impact factor: 11.205

9.  Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds.

Authors:  Josefa Antón; Aharon Oren; Susana Benlloch; Francisco Rodríguez-Valera; Rudolf Amann; Ramón Rosselló-Mora
Journal:  Int J Syst Evol Microbiol       Date:  2002-03       Impact factor: 2.747

10.  Ultrafast time-resolved carotenoid to-bacteriochlorophyll energy transfer in LH2 complexes from photosynthetic bacteria.

Authors:  Hong Cong; Dariusz M Niedzwiedzki; George N Gibson; Amy M LaFountain; Rhiannon M Kelsh; Alastair T Gardiner; Richard J Cogdell; Harry A Frank
Journal:  J Phys Chem B       Date:  2008-07-31       Impact factor: 2.991

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  32 in total

1.  Aspartate-histidine interaction in the retinal schiff base counterion of the light-driven proton pump of Exiguobacterium sibiricum.

Authors:  S P Balashov; L E Petrovskaya; E P Lukashev; E S Imasheva; A K Dioumaev; J M Wang; S V Sychev; D A Dolgikh; A B Rubin; M P Kirpichnikov; J K Lanyi
Journal:  Biochemistry       Date:  2012-07-10       Impact factor: 3.162

Review 2.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

Review 3.  Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria.

Authors:  Sandeep B Gaudana; Jan Zarzycki; Vamsi K Moparthi; Cheryl A Kerfeld
Journal:  Photosynth Res       Date:  2014-11-16       Impact factor: 3.573

4.  Diversity, Mechanism, and Optogenetic Application of Light-Driven Ion Pump Rhodopsins.

Authors:  Keiichi Inoue
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

5.  acI Actinobacteria Assemble a Functional Actinorhodopsin with Natively Synthesized Retinal.

Authors:  Jeffrey R Dwulit-Smith; Joshua J Hamilton; David M Stevenson; Shaomei He; Ben O Oyserman; Francisco Moya-Flores; Sarahi L Garcia; Daniel Amador-Noguez; Katherine D McMahon; Katrina T Forest
Journal:  Appl Environ Microbiol       Date:  2018-11-30       Impact factor: 4.792

6.  Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage.

Authors:  Trevor W Ghylin; Sarahi L Garcia; Francisco Moya; Ben O Oyserman; Patrick Schwientek; Katrina T Forest; James Mutschler; Jeffrey Dwulit-Smith; Leong-Keat Chan; Manuel Martinez-Garcia; Alexander Sczyrba; Ramunas Stepanauskas; Hans-Peter Grossart; Tanja Woyke; Falk Warnecke; Rex Malmstrom; Stefan Bertilsson; Katherine D McMahon
Journal:  ISME J       Date:  2014-08-05       Impact factor: 10.302

7.  Nature's toolkit for microbial rhodopsin ion pumps.

Authors:  Oded Béjà; Janos K Lanyi
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-15       Impact factor: 11.205

8.  X-ray Crystallographic Structure of Thermophilic Rhodopsin: IMPLICATIONS FOR HIGH THERMAL STABILITY AND OPTOGENETIC FUNCTION.

Authors:  Takashi Tsukamoto; Kenji Mizutani; Taisuke Hasegawa; Megumi Takahashi; Naoya Honda; Naoki Hashimoto; Kazumi Shimono; Keitaro Yamashita; Masaki Yamamoto; Seiji Miyauchi; Shin Takagi; Shigehiko Hayashi; Takeshi Murata; Yuki Sudo
Journal:  J Biol Chem       Date:  2016-04-18       Impact factor: 5.157

Review 9.  Marine Bacterial and Archaeal Ion-Pumping Rhodopsins: Genetic Diversity, Physiology, and Ecology.

Authors:  Jarone Pinhassi; Edward F DeLong; Oded Béjà; José M González; Carlos Pedrós-Alió
Journal:  Microbiol Mol Biol Rev       Date:  2016-09-14       Impact factor: 11.056

Review 10.  Computational studies of membrane proteins: models and predictions for biological understanding.

Authors:  Jie Liang; Hammad Naveed; David Jimenez-Morales; Larisa Adamian; Meishan Lin
Journal:  Biochim Biophys Acta       Date:  2011-10-12
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