Literature DB >> 19836327

Proteins do not have strong spines after all.

Zbigniew Dauter1, Alexander Wlodawer.   

Abstract

In this issue of Structure, Berkholz et al. show that the detailed backbone geometry of proteins depends on the local conformation and suggest how this information can be practically used in modeling and refining protein structures.

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Year:  2009        PMID: 19836327     DOI: 10.1016/j.str.2009.09.002

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  4 in total

1.  Using a conformation-dependent stereochemical library improves crystallographic refinement of proteins.

Authors:  Dale E Tronrud; Donald S Berkholz; P Andrew Karplus
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-06-19

2.  Conformation-dependent backbone geometry restraints set a new standard for protein crystallographic refinement.

Authors:  Nigel W Moriarty; Dale E Tronrud; Paul D Adams; P Andrew Karplus
Journal:  FEBS J       Date:  2014-06-17       Impact factor: 5.542

3.  Interplay between peptide bond geometrical parameters in nonglobular structural contexts.

Authors:  Luciana Esposito; Nicole Balasco; Alfonso De Simone; Rita Berisio; Luigi Vitagliano
Journal:  Biomed Res Int       Date:  2013-12-26       Impact factor: 3.411

4.  A new default restraint library for the protein backbone in Phenix: a conformation-dependent geometry goes mainstream.

Authors:  Nigel W Moriarty; Dale E Tronrud; Paul D Adams; P Andrew Karplus
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-01-01       Impact factor: 7.652

  4 in total

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