Literature DB >> 19833097

Reconstitution in vitro of the catalytic portion (NtpA3-B3-D-G complex) of Enterococcus hirae V-type Na+-ATPase.

Satoshi Arai1, Ichiro Yamato, Asuka Shiokawa, Shinya Saijo, Yoshimi Kakinuma, Yoshiko Ishizuka-Katsura, Mitsutoshi Toyama, Takaho Terada, Mikako Shirouzu, Shigeyuki Yokoyama, So Iwata, Takeshi Murata.   

Abstract

Enterococcus hirae vacuolar ATPase (V-ATPase) is composed of a soluble catalytic domain (V(1); NtpA(3)-B(3)-D-G) and an integral membrane domain (V(0); NtpI-K(10)) connected by a central and peripheral stalk(s) (NtpC and NtpE-F). Here we examined the nucleotide binding of NtpA monomer, NtpB monomer or NtpD-G heterodimer purified by using Escherichia coli expression system in vivo or in vitro, and the reconstitution of the V(1) portion with these polypeptides. The affinity of nucleotide binding to NtpA was 6.6 microM for ADP or 3.1 microM for ATP, while NtpB or NtpD-G did not show any binding. The NtpA and NtpB monomers assembled into NtpA(3)-B(3) heterohexamer in nucleotide binding-dependent manner. NtpD-G bound NtpA(3)-B(3) forming V(1) (NtpA(3)-B(3)-D-G) complex independent of nucleotides. The V(1) formation from individual NtpA and NtpB monomers with NtpD-G heterodimer was absolutely dependent on nucleotides. The ATPase activity of reconstituted V(1) complex was as high as that of native V(1)-ATPase purified from the V(0)V(1) complex by EDTA treatment of cell membrane. This in vitro reconstitution system of E. hirae V(1) complex will be valuable for characterizing the subunit-subunit interactions and assembly mechanism of the V(1)-ATPase complex.

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Year:  2009        PMID: 19833097     DOI: 10.1016/j.bbrc.2009.10.032

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  8 in total

1.  Crystal structure of the central axis DF complex of the prokaryotic V-ATPase.

Authors:  Shinya Saijo; Satoshi Arai; K M Mozaffor Hossain; Ichiro Yamato; Kano Suzuki; Yoshimi Kakinuma; Yoshiko Ishizuka-Katsura; Noboru Ohsawa; Takaho Terada; Mikako Shirouzu; Shigeyuki Yokoyama; So Iwata; Takeshi Murata
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-23       Impact factor: 11.205

2.  Rotation mechanism of Enterococcus hirae V1-ATPase based on asymmetric crystal structures.

Authors:  Satoshi Arai; Shinya Saijo; Kano Suzuki; Kenji Mizutani; Yoshimi Kakinuma; Yoshiko Ishizuka-Katsura; Noboru Ohsawa; Takaho Terada; Mikako Shirouzu; Shigeyuki Yokoyama; So Iwata; Ichiro Yamato; Takeshi Murata
Journal:  Nature       Date:  2013-01-13       Impact factor: 49.962

3.  Crystal structure of yeast V1-ATPase in the autoinhibited state.

Authors:  Rebecca A Oot; Patricia M Kane; Edward A Berry; Stephan Wilkens
Journal:  EMBO J       Date:  2016-06-13       Impact factor: 11.598

4.  Loose binding of the DF axis with the A3B3 complex stimulates the initial activity of Enterococcus hirae V1-ATPase.

Authors:  Md Jahangir Alam; Satoshi Arai; Shinya Saijo; Kano Suzuki; Kenji Mizutani; Yoshiko Ishizuka-Katsura; Noboru Ohsawa; Takaho Terada; Mikako Shirouzu; Shigeyuki Yokoyama; So Iwata; Yoshimi Kakinuma; Ichiro Yamato; Takeshi Murata
Journal:  PLoS One       Date:  2013-09-13       Impact factor: 3.240

5.  Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor.

Authors:  Kano Suzuki; Kenji Mizutani; Shintaro Maruyama; Kazumi Shimono; Fabiana L Imai; Eiro Muneyuki; Yoshimi Kakinuma; Yoshiko Ishizuka-Katsura; Mikako Shirouzu; Shigeyuki Yokoyama; Ichiro Yamato; Takeshi Murata
Journal:  Nat Commun       Date:  2016-10-27       Impact factor: 14.919

6.  Rotation Mechanism of Molecular Motor V1-ATPase Studied by Multiscale Molecular Dynamics Simulation.

Authors:  Yuta Isaka; Toru Ekimoto; Yuichi Kokabu; Ichiro Yamato; Takeshi Murata; Mitsunori Ikeguchi
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

7.  Revealing a Hidden Intermediate of Rotatory Catalysis with X-ray Crystallography and Molecular Simulations.

Authors:  Mrinal Shekhar; Chitrak Gupta; Kano Suzuki; Chun Kit Chan; Takeshi Murata; Abhishek Singharoy
Journal:  ACS Cent Sci       Date:  2022-06-14       Impact factor: 18.728

8.  Mutant LV(476-7)AA of A-subunit of Enterococcus hirae V1-ATPase: High affinity of A3B3 complex to DF axis and low ATPase activity.

Authors:  Jahangir Alam; Ichiro Yamato; Satoshi Arai; Shinya Saijo; Kenji Mizutani; Yoshiko Ishizuka-Katsura; Noboru Ohsawa; Takaho Terada; Mikako Shirouzu; Shigeyuki Yokoyama; So Iwata; Yoshimi Kakinuma; Takeshi Murata
Journal:  Springerplus       Date:  2013-12-27
  8 in total

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