Literature DB >> 19833003

Decoding the multifaceted HIV-1 virus-host interactome.

Eric Y Chan1, Marcus J Korth, Michael G Katze.   

Abstract

Recently in BMC Medical Genomics, Tozeren and colleagues have uncovered virus-host interactions by searching for conserved peptide motifs in HIV and human proteins. Their computational model provides a novel perspective in the interpretation of high-throughput data on the HIV-host interactome.

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Year:  2009        PMID： 19833003      PMCID： PMC2776905          DOI： 10.1186/jbiol183

Source DB:  PubMed          Journal:  J Biol        ISSN： 1475-4924


  9 in total

1.  Cellular microRNA and P bodies modulate host-HIV-1 interactions.

Authors:  Robin Nathans; Chia-Ying Chu; Anna Kristina Serquina; Chih-Chung Lu; Hong Cao; Tariq M Rana
Journal:  Mol Cell       Date:  2009-06-26       Impact factor: 17.970

2.  Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication.

Authors:  Renate König; Yingyao Zhou; Daniel Elleder; Tracy L Diamond; Ghislain M C Bonamy; Jeffrey T Irelan; Chih-Yuan Chiang; Buu P Tu; Paul D De Jesus; Caroline E Lilley; Shannon Seidel; Amanda M Opaluch; Jeremy S Caldwell; Matthew D Weitzman; Kelli L Kuhen; Sourav Bandyopadhyay; Trey Ideker; Anthony P Orth; Loren J Miraglia; Frederic D Bushman; John A Young; Sumit K Chanda
Journal:  Cell       Date:  2008-10-03       Impact factor: 41.582

3.  Genome-scale RNAi screen for host factors required for HIV replication.

Authors:  Honglin Zhou; Min Xu; Qian Huang; Adam T Gates; Xiaohua D Zhang; John C Castle; Erica Stec; Marc Ferrer; Berta Strulovici; Daria J Hazuda; Amy S Espeseth
Journal:  Cell Host Microbe       Date:  2008-10-30       Impact factor: 21.023

4.  Dynamic host energetics and cytoskeletal proteomes in human immunodeficiency virus type 1-infected human primary CD4 cells: analysis by multiplexed label-free mass spectrometry.

Authors:  Eric Y Chan; Jennifer N Sutton; Jon M Jacobs; Andrey Bondarenko; Richard D Smith; Michael G Katze
Journal:  J Virol       Date:  2009-07-08       Impact factor: 5.103

5.  Identification of host proteins required for HIV infection through a functional genomic screen.

Authors:  Abraham L Brass; Derek M Dykxhoorn; Yair Benita; Nan Yan; Alan Engelman; Ramnik J Xavier; Judy Lieberman; Stephen J Elledge
Journal:  Science       Date:  2008-01-10       Impact factor: 47.728

Review 6.  Host cell factors in HIV replication: meta-analysis of genome-wide studies.

Authors:  Frederic D Bushman; Nirav Malani; Jason Fernandes; Iván D'Orso; Gerard Cagney; Tracy L Diamond; Honglin Zhou; Daria J Hazuda; Amy S Espeseth; Renate König; Sourav Bandyopadhyay; Trey Ideker; Stephen P Goff; Nevan J Krogan; Alan D Frankel; John A T Young; Sumit K Chanda
Journal:  PLoS Pathog       Date:  2009-05-29       Impact factor: 6.823

7.  Prediction of HIV-1 virus-host protein interactions using virus and host sequence motifs.

Authors:  Perry Evans; William Dampier; Lyle Ungar; Aydin Tozeren
Journal:  BMC Med Genomics       Date:  2009-05-18       Impact factor: 3.063

8.  Host sequence motifs shared by HIV predict response to antiretroviral therapy.

Authors:  William Dampier; Perry Evans; Lyle Ungar; Aydin Tozeren
Journal:  BMC Med Genomics       Date:  2009-07-23       Impact factor: 3.063

9.  Microarray study reveals that HIV-1 induces rapid type-I interferon-dependent p53 mRNA up-regulation in human primary CD4+ T cells.

Authors:  Michaël Imbeault; Michel Ouellet; Michel J Tremblay
Journal:  Retrovirology       Date:  2009-01-15       Impact factor: 4.602
  9 in total
  5 in total

Review 1.  The Road Less Traveled: HIV's Use of Alternative Routes through Cellular Pathways.

Authors:  Ailie Marx; Akram Alian
Journal:  J Virol       Date:  2015-03-11       Impact factor: 5.103

2.  Nucleolar protein trafficking in response to HIV-1 Tat: rewiring the nucleolus.

Authors:  Mohamed Ali Jarboui; Carlo Bidoia; Elena Woods; Barbara Roe; Kieran Wynne; Giuliano Elia; William W Hall; Virginie W Gautier
Journal:  PLoS One       Date:  2012-11-15       Impact factor: 3.240

3.  Role of TIM-4 in exosome-dependent entry of HIV-1 into human immune cells.

Authors:  Brian Sims; Anitra L Farrow; Sparkle D Williams; Anju Bansal; Alexandre Krendelchtchikov; Linlin Gu; Qiana L Matthews
Journal:  Int J Nanomedicine       Date:  2017-07-06

Review 4.  Systems approaches to influenza-virus host interactions and the pathogenesis of highly virulent and pandemic viruses.

Authors:  Marcus J Korth; Nicolas Tchitchek; Arndt G Benecke; Michael G Katze
Journal:  Semin Immunol       Date:  2012-12-05       Impact factor: 11.130

Review 5.  HIV and Proteomics: What We Have Learned from High Throughput Studies.

Authors:  Kinga Grabowska; Emma Harwood; Pawel Ciborowski
Journal:  Proteomics Clin Appl       Date:  2020-10-14       Impact factor: 3.494
  5 in total

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