Literature DB >> 19829749

Insight into the Protein Components of the Box H/ACA RNP.

John Karijolich1, Yi-Tao Yu.   

Abstract

Among eukaryotic organisms a vast majority of Box H/ACA ribonucleoproteins (RNPs) are responsible for the post-transcriptional introduction of pseudouridine (Psi) into ribosomal RNAs (rRNA) and spliceosomal small nuclear RNAs (snRNA), thus influencing protein translation and pre-mRNA splicing, respectively. Additionally, a few distinct Box H/ACA RNPs are involved in the processing of rRNA, and the stabilization of vertebrate telomerase RNA. Thus, whether directly or indirectly, Box H/ACA RNPs impact major steps of gene expression, as well as play a role in maintaining genome integrity. Box H/ACA RNPs each consist of a unique Box H/ACA RNA and a set of four common core proteins. While the RNA component is responsible for dictating site-specificity, the four core proteins impact numerous aspects of RNP function including both stability and catalytic potential. Interestingly, mutations have been identified in the core proteins of the Box H/ACA RNP, resulting in a rare inherited bone marrow failure syndrome referred to as dyskeratosis congenita. This review discusses our current understanding of the roles of the protein components of the Box H/ACA RNP, and provides a framework to understand how mutations in the Box H/ACA RNP contribute to disease pathology.

Entities:  

Year:  2008        PMID: 19829749      PMCID: PMC2760984          DOI: 10.2174/157016408784911936

Source DB:  PubMed          Journal:  Curr Proteomics        ISSN: 1570-1646            Impact factor:   0.837


  84 in total

1.  Box H and box ACA are nucleolar localization elements of U17 small nucleolar RNA.

Authors:  T S Lange; M Ezrokhi; F Amaldi; S A Gerbi
Journal:  Mol Biol Cell       Date:  1999-11       Impact factor: 4.138

2.  A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP.

Authors:  N J Watkins; V Ségault; B Charpentier; S Nottrott; P Fabrizio; A Bachi; M Wilm; M Rosbash; C Branlant; R Lührmann
Journal:  Cell       Date:  2000-10-27       Impact factor: 41.582

3.  Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea.

Authors:  Timofey S Rozhdestvensky; Thean Hock Tang; Inna V Tchirkova; Jürgen Brosius; Jean-Pierre Bachellerie; Alexander Hüttenhofer
Journal:  Nucleic Acids Res       Date:  2003-02-01       Impact factor: 16.971

4.  The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs.

Authors:  Tomoko Hamma; Steve L Reichow; Gabriele Varani; Adrian R Ferré-D'Amaré
Journal:  Nat Struct Mol Biol       Date:  2005-11-15       Impact factor: 15.369

5.  Evolutionary appearance of genes encoding proteins associated with box H/ACA snoRNAs: cbf5p in Euglena gracilis, an early diverging eukaryote, and candidate Gar1p and Nop10p homologs in archaebacteria.

Authors:  Y Watanabe; M W Gray
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

6.  The snoRNA domain of vertebrate telomerase RNA functions to localize the RNA within the nucleus.

Authors:  A A Lukowiak; A Narayanan; Z H Li; R M Terns; M P Terns
Journal:  RNA       Date:  2001-12       Impact factor: 4.942

7.  The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase.

Authors:  D L Lafontaine; C Bousquet-Antonelli; Y Henry; M Caizergues-Ferrer; D Tollervey
Journal:  Genes Dev       Date:  1998-02-15       Impact factor: 11.361

8.  Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita.

Authors:  Andrew Yoon; Guang Peng; Yves Brandenburger; Yves Brandenburg; Ornella Zollo; Wei Xu; Eduardo Rego; Davide Ruggero
Journal:  Science       Date:  2006-05-12       Impact factor: 47.728

9.  A common sequence motif determines the Cajal body-specific localization of box H/ACA scaRNAs.

Authors:  Patricia Richard; Xavier Darzacq; Edouard Bertrand; Beáta E Jády; Céline Verheggen; Tamás Kiss
Journal:  EMBO J       Date:  2003-08-15       Impact factor: 11.598

10.  Isolation and characterization of the small nucleolar ribonucleoprotein particle snR30 from Saccharomyces cerevisiae.

Authors:  B Lübben; P Fabrizio; B Kastner; R Lührmann
Journal:  J Biol Chem       Date:  1995-05-12       Impact factor: 5.157

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  5 in total

1.  Pseudouridine formation in archaeal RNAs: The case of Haloferax volcanii.

Authors:  Ian K Blaby; Mrinmoyee Majumder; Kunal Chatterjee; Sujata Jana; Henri Grosjean; Valérie de Crécy-Lagard; Ramesh Gupta
Journal:  RNA       Date:  2011-05-31       Impact factor: 4.942

2.  Purification and Functional Reconstitution of Box H/ACA Ribonucleoprotein Particles.

Authors:  Chao Huang; Guowei Wu; Yi-Tao Yu
Journal:  Methods Mol Biol       Date:  2016

3.  Inducing nonsense suppression by targeted pseudouridylation.

Authors:  Chao Huang; Guowei Wu; Yi-Tao Yu
Journal:  Nat Protoc       Date:  2012-03-29       Impact factor: 13.491

4.  Pseudouridine in mRNA: Incorporation, Detection, and Recoding.

Authors:  Guowei Wu; Chao Huang; Yi-Tao Yu
Journal:  Methods Enzymol       Date:  2015-04-27       Impact factor: 1.600

5.  Structure-function relationships of archaeal Cbf5 during in vivo RNA-guided pseudouridylation.

Authors:  Mrinmoyee Majumder; Michael S Bosmeny; Ramesh Gupta
Journal:  RNA       Date:  2016-08-18       Impact factor: 4.942

  5 in total

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