Literature DB >> 19828437

Transient structural distortion of metal-free Cu/Zn superoxide dismutase triggers aberrant oligomerization.

Kaare Teilum1, Melanie H Smith, Eike Schulz, Lea C Christensen, Gleb Solomentsev, Mikael Oliveberg, Mikael Akke.   

Abstract

Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease linked to the misfolding of Cu/Zn superoxide dismutase (SOD1). ALS-related defects in SOD1 result in a gain of toxic function that coincides with aberrant oligomerization. The structural events triggering oligomerization have remained enigmatic, however, as is the case in other protein-misfolding diseases. Here, we target the critical conformational change that defines the earliest step toward aggregation. Using nuclear spin relaxation dispersion experiments, we identified a short-lived (0.4 ms) and weakly populated (0.7%) conformation of metal-depleted SOD1 that triggers aberrant oligomerization. This excited state emanates from the folded ground state and is suppressed by metal binding, but is present in both the disulfide-oxidized and disulfide-reduced forms of the protein. Our results pinpoint a perturbed region of the excited-state structure that forms intermolecular contacts in the earliest nonnative dimer/oligomer. The conformational transition that triggers oligomerization is a common feature of WT SOD1 and ALS-associated mutants that have widely different physicochemical properties. But compared with WT SOD1, the mutants have enhanced structural distortions in their excited states, and in some cases slightly higher excited-state populations and lower kinetic barriers, implying increased susceptibility to oligomerization. Our results provide a unified picture that highlights both (i) a common denominator among different SOD1 variants that may explain why diverse mutations cause the same disease, and (ii) a structural basis that may aid in understanding how different mutations affect disease propensity and progression.

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Year:  2009        PMID: 19828437      PMCID: PMC2775296          DOI: 10.1073/pnas.0907387106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

1.  Conversion to the amyotrophic lateral sclerosis phenotype is associated with intermolecular linked insoluble aggregates of SOD1 in mitochondria.

Authors:  Han-Xiang Deng; Yong Shi; Yoshiaki Furukawa; Hong Zhai; Ronggen Fu; Erdong Liu; George H Gorrie; Mohammad S Khan; Wu-Yen Hung; Eileen H Bigio; Thomas Lukas; Mauro C Dal Canto; Thomas V O'Halloran; Teepu Siddique
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-24       Impact factor: 11.205

Review 2.  Structure, folding, and misfolding of Cu,Zn superoxide dismutase in amyotrophic lateral sclerosis.

Authors:  Rishi Rakhit; Avijit Chakrabartty
Journal:  Biochim Biophys Acta       Date:  2006-05-22

Review 3.  New tools provide new insights in NMR studies of protein dynamics.

Authors:  Anthony Mittermaier; Lewis E Kay
Journal:  Science       Date:  2006-04-14       Impact factor: 47.728

4.  Impaired post-translational folding of familial ALS-linked Cu, Zn superoxide dismutase mutants.

Authors:  Cami K Bruns; Ron R Kopito
Journal:  EMBO J       Date:  2007-01-25       Impact factor: 11.598

5.  Practical aspects of (1)H transverse paramagnetic relaxation enhancement measurements on macromolecules.

Authors:  Junji Iwahara; Chun Tang; G Marius Clore
Journal:  J Magn Reson       Date:  2006-11-02       Impact factor: 2.229

6.  Folding of Cu/Zn superoxide dismutase suggests structural hotspots for gain of neurotoxic function in ALS: parallels to precursors in amyloid disease.

Authors:  Anna Nordlund; Mikael Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-23       Impact factor: 11.205

Review 7.  Molecular biology of amyotrophic lateral sclerosis: insights from genetics.

Authors:  Piera Pasinelli; Robert H Brown
Journal:  Nat Rev Neurosci       Date:  2006-09       Impact factor: 34.870

8.  Systematically perturbed folding patterns of amyotrophic lateral sclerosis (ALS)-associated SOD1 mutants.

Authors:  Mikael J Lindberg; Roberth Byström; Niklas Boknäs; Peter M Andersen; Mikael Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-29       Impact factor: 11.205

9.  Solution structure of Apo Cu,Zn superoxide dismutase: role of metal ions in protein folding.

Authors:  Lucia Banci; Ivano Bertini; Fiorenza Cramaro; Rebecca Del Conte; Maria Silvia Viezzoli
Journal:  Biochemistry       Date:  2003-08-19       Impact factor: 3.162

10.  Amyloid formation under physiological conditions proceeds via a native-like folding intermediate.

Authors:  Thomas R Jahn; Martin J Parker; Steve W Homans; Sheena E Radford
Journal:  Nat Struct Mol Biol       Date:  2006-02-19       Impact factor: 15.369

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  32 in total

1.  Structural basis of Cu, Zn-superoxide dismutase amyloid fibril formation involves interaction of multiple peptide core regions.

Authors:  Masataka Ida; Mizuho Ando; Masayuki Adachi; Asumi Tanaka; Kodai Machida; Kunihiro Hongo; Tomohiro Mizobata; Miho Yoshida Yamakawa; Yasuhiro Watanabe; Kenji Nakashima; Yasushi Kawata
Journal:  J Biochem       Date:  2015-08-29       Impact factor: 3.387

2.  Non-uniform sampling of NMR relaxation data.

Authors:  Troels E Linnet; Kaare Teilum
Journal:  J Biomol NMR       Date:  2016-02-04       Impact factor: 2.835

3.  Direct single-molecule observation of calcium-dependent misfolding in human neuronal calcium sensor-1.

Authors:  Pétur O Heidarsson; Mohsin M Naqvi; Mariela R Otazo; Alessandro Mossa; Birthe B Kragelund; Ciro Cecconi
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-25       Impact factor: 11.205

4.  Transcriptional profiling in the lumbar spinal cord of a mouse model of amyotrophic lateral sclerosis: a role for wild-type superoxide dismutase 1 in sporadic disease?

Authors:  Antonello D'Arrigo; Davide Colavito; Emiliano Peña-Altamira; Michele Fabris; Mauro Dam; Antonio Contestabile; Alberta Leon
Journal:  J Mol Neurosci       Date:  2010-02-23       Impact factor: 3.444

Review 5.  The structural biochemistry of the superoxide dismutases.

Authors:  J J P Perry; D S Shin; E D Getzoff; J A Tainer
Journal:  Biochim Biophys Acta       Date:  2009-11-13

6.  Global structural motions from the strain of a single hydrogen bond.

Authors:  Jens Danielsson; Wael Awad; Kadhirvel Saraboji; Martin Kurnik; Lisa Lang; Lina Leinartaite; Stefan L Marklund; Derek T Logan; Mikael Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

7.  Network mapping of the conformational heterogeneity of SOD1 by deploying statistical cluster analysis of FTIR spectra.

Authors:  Sourav Chowdhury; Sagnik Sen; Amrita Banerjee; Vladimir N Uversky; Ujjwal Maulik; Krishnananda Chattopadhyay
Journal:  Cell Mol Life Sci       Date:  2019-04-22       Impact factor: 9.261

8.  A model for non-obligate oligomer formation in protein aggregration.

Authors:  Eamonn F Healy
Journal:  Biochem Biophys Res Commun       Date:  2015-08-15       Impact factor: 3.575

9.  Metal-free ALS variants of dimeric human Cu,Zn-superoxide dismutase have enhanced populations of monomeric species.

Authors:  Anna-Karin E Svensson; Osman Bilsel; Can Kayatekin; Jessica A Adefusika; Jill A Zitzewitz; C Robert Matthews
Journal:  PLoS One       Date:  2010-04-09       Impact factor: 3.240

10.  Local cooperativity in an amyloidogenic state of human lysozyme observed at atomic resolution.

Authors:  Anne Dhulesia; Nunilo Cremades; Janet R Kumita; Shang-Te Danny Hsu; Maria F Mossuto; Mireille Dumoulin; Daniel Nietlispach; Mikael Akke; Xavier Salvatella; Christopher M Dobson
Journal:  J Am Chem Soc       Date:  2010-11-10       Impact factor: 15.419

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