Literature DB >> 19826748

Molecular evolution of the mtDNA encoded rps3 gene among filamentous ascomycetes fungi with an emphasis on the Ophiostomatoid fungi.

Jyothi Sethuraman1, Anna Majer, Mahmood Iranpour, Georg Hausner.   

Abstract

The mitochondrial ribosomal protein S3 (rps3) gene within the fungi is extremely diverse in location and organization, some versions of this gene have been incorporated into a group I intron, others appear to have gained large insertions, microsatellite expansions, or have been invaded by homing endonucleases. Among the ascomycetes fungi the group I intron encoded version of rps3 appears to have a rather complex evolutionary history including first the acquisition of rps3 by a group I intron (mL2449), the loss of the mL2499 intron and the establishment of rps3 as a free-standing gene, and the eventual loss of the intron derived version of rps3.

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Year:  2009        PMID: 19826748     DOI: 10.1007/s00239-009-9291-9

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  79 in total

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Authors:  J Laroche; J Bousquet
Journal:  Mol Biol Evol       Date:  1999-04       Impact factor: 16.240

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Authors:  Vassili N Kouvelis; Dimitri V Ghikas; Milton A Typas
Journal:  Fungal Genet Biol       Date:  2004-10       Impact factor: 3.495

3.  Interactions among Scolytid bark beetles, their associated fungi, and live host conifers.

Authors:  T D Paine; K F Raffa; T C Harrington
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4.  Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins.

Authors:  Linda Bonen; Sophie Calixte
Journal:  Mol Biol Evol       Date:  2005-12-20       Impact factor: 16.240

Review 5.  Research Coordination Networks: a phylogeny for kingdom Fungi (Deep Hypha).

Authors:  Meredith Blackwell; David S Hibbett; John W Taylor; Joseph W Spatafora
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6.  Ribosomal protein gene-based phylogeny for finer differentiation and classification of phytoplasmas.

Authors:  M Martini; I-M Lee; K D Bottner; Y Zhao; S Botti; A Bertaccini; N A Harrison; L Carraro; C Marcone; A J Khan; R Osler
Journal:  Int J Syst Evol Microbiol       Date:  2007-09       Impact factor: 2.747

7.  The complete mitochondrial genome of the vascular wilt fungus Verticillium dahliae: a novel gene order for Verticillium and a diagnostic tool for species identification.

Authors:  Malena P Pantou; Vassili N Kouvelis; Milton A Typas
Journal:  Curr Genet       Date:  2006-05-30       Impact factor: 3.886

8.  Function of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase in RNA splicing. Role of the idiosyncratic N-terminal extension and different modes of interaction with different group I introns.

Authors:  G Mohr; R Rennard; A D Cherniack; J Stryker; A M Lambowitz
Journal:  J Mol Biol       Date:  2001-03-16       Impact factor: 5.469

9.  Mutants in a mosaic gene reveal functions for introns.

Authors:  B Dujon
Journal:  Nature       Date:  1979 Dec 20-27       Impact factor: 49.962

10.  A comparison of three fission yeast mitochondrial genomes.

Authors:  C E Bullerwell; J Leigh; L Forget; B F Lang
Journal:  Nucleic Acids Res       Date:  2003-01-15       Impact factor: 16.971

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  19 in total

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Authors:  Peter G Hendrickson; Margaret E Silliker
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3.  Mitochondrial genome evolution in species belonging to the Phialocephala fortinii s.l. - Acephala applanata species complex.

Authors:  Angelo Duò; Rémy Bruggmann; Stefan Zoller; Matthias Bernt; Christoph R Grünig
Journal:  BMC Genomics       Date:  2012-05-04       Impact factor: 3.969

4.  The Oxytricha trifallax mitochondrial genome.

Authors:  Estienne C Swart; Mariusz Nowacki; Justine Shum; Heather Stiles; Brian P Higgins; Thomas G Doak; Klaas Schotanus; Vincent J Magrini; Patrick Minx; Elaine R Mardis; Laura F Landweber
Journal:  Genome Biol Evol       Date:  2011-12-16       Impact factor: 3.416

5.  Complete mitochondrial genome of the medicinal fungus Ophiocordyceps sinensis.

Authors:  Yi Li; Xiao-Di Hu; Rui-Heng Yang; Tom Hsiang; Ke Wang; De-Quan Liang; Fan Liang; De-Ming Cao; Fan Zhou; Ge Wen; Yi-Jian Yao
Journal:  Sci Rep       Date:  2015-09-15       Impact factor: 4.379

6.  Complete Genome Sequence of Sporisorium scitamineum and Biotrophic Interaction Transcriptome with Sugarcane.

Authors:  Lucas M Taniguti; Patricia D C Schaker; Juliana Benevenuto; Leila P Peters; Giselle Carvalho; Alessandra Palhares; Maria C Quecine; Filipe R S Nunes; Maria C P Kmit; Alvan Wai; Georg Hausner; Karen S Aitken; Paul J Berkman; James A Fraser; Paula M Moolhuijzen; Luiz L Coutinho; Silvana Creste; Maria L C Vieira; João P Kitajima; Claudia B Monteiro-Vitorello
Journal:  PLoS One       Date:  2015-06-12       Impact factor: 3.240

7.  Analysis of the complete mitochondrial genome of Pochonia chlamydosporia suggests a close relationship to the invertebrate-pathogenic fungi in Hypocreales.

Authors:  Runmao Lin; Chichuan Liu; Baoming Shen; Miao Bai; Jian Ling; Guohua Chen; Zhenchuan Mao; Xinyue Cheng; Bingyan Xie
Journal:  BMC Microbiol       Date:  2015-01-31       Impact factor: 3.605

8.  Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome.

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9.  The 203 kbp mitochondrial genome of the phytopathogenic fungus Sclerotinia borealis reveals multiple invasions of introns and genomic duplications.

Authors:  Andrey V Mardanov; Alexey V Beletsky; Vitaly V Kadnikov; Alexander N Ignatov; Nikolai V Ravin
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10.  Complete mitochondrial genome of the Verticillium-wilt causing plant pathogen Verticillium nonalfalfae.

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Journal:  PLoS One       Date:  2016-02-03       Impact factor: 3.240

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