Literature DB >> 19826454

Sporadic cases are the norm for complex disease.

Jian Yang1, Peter M Visscher, Naomi R Wray.   

Abstract

The results of genome-wide association studies have revealed that most human complex diseases (for example, cancer, diabetes and psychiatric disorders) are affected by a large number of variants, each of which explains a small increase in disease risk, suggesting a pattern of polygenic inheritance. At the same time, it has been argued that most complex diseases are genetically heterogeneous because many sporadic cases are observed, as well as cases with a family history. In this study, under the assumption of polygenic inheritance, we derive the expected proportion of sporadic cases using analytical methods and simulation. We show how the proportion of sporadic cases depends on disease prevalence (K) and heritability on the underlying liability scale (h(L)(2)). We predict the underlying heritability and the proportion of sporadic cases for a range of human complex diseases, and show that this proportion is typically large. For a disease with h(L)(2)=63% and K=0.4%, such as schizophrenia, >83% of proband cases are predicted to be sporadic (no affected first-, second- and third-degree relatives) in typical families (on an average, two children per couple). For the majority of these diseases, a large proportion of sporadic cases is expected under the polygenic model, implying that the observed large proportion of sporadic cases is not informative to the causal mechanism of a complex genetic disease.

Entities:  

Mesh:

Year:  2009        PMID: 19826454      PMCID: PMC2987426          DOI: 10.1038/ejhg.2009.177

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  33 in total

Review 1.  Genetic epidemiology of rheumatoid arthritis.

Authors:  S Harney; B P Wordsworth
Journal:  Tissue Antigens       Date:  2002-12

Review 2.  The genetic epidemiology of cancer: interpreting family and twin studies and their implications for molecular genetic approaches.

Authors:  N Risch
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2001-07       Impact factor: 4.254

3.  Recurrence risks for schizophrenia in a Swedish national cohort.

Authors:  Paul Lichtenstein; Camilla Björk; Christina M Hultman; Edward Scolnick; Pamela Sklar; Patrick F Sullivan
Journal:  Psychol Med       Date:  2006-07-25       Impact factor: 7.723

4.  Familial risks for asthma among twins and other siblings based on hospitalizations in Sweden.

Authors:  K Hemminki; X Li; K Sundquist; J Sundquist
Journal:  Clin Exp Allergy       Date:  2007-09       Impact factor: 5.018

5.  Sporadic vs familial classification given etiologic heterogeneity: I. Sensitivity, specificity, and positive and negative predictive value.

Authors:  K S Kendler
Journal:  Genet Epidemiol       Date:  1987       Impact factor: 2.135

6.  Why are the majority of hereditary cases of early-onset breast cancer sporadic? A simulation study.

Authors:  J Cui; J L Hopper
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2000-08       Impact factor: 4.254

7.  Genetic susceptibility to death from coronary heart disease in a study of twins.

Authors:  M E Marenberg; N Risch; L F Berkman; B Floderus; U de Faire
Journal:  N Engl J Med       Date:  1994-04-14       Impact factor: 91.245

8.  Common genetic determinants of schizophrenia and bipolar disorder in Swedish families: a population-based study.

Authors:  Paul Lichtenstein; Benjamin H Yip; Camilla Björk; Yudi Pawitan; Tyrone D Cannon; Patrick F Sullivan; Christina M Hultman
Journal:  Lancet       Date:  2009-01-17       Impact factor: 79.321

9.  Multiple loci identified in a genome-wide association study of prostate cancer.

Authors:  Gilles Thomas; Kevin B Jacobs; Meredith Yeager; Peter Kraft; Sholom Wacholder; Nick Orr; Kai Yu; Nilanjan Chatterjee; Robert Welch; Amy Hutchinson; Andrew Crenshaw; Geraldine Cancel-Tassin; Brian J Staats; Zhaoming Wang; Jesus Gonzalez-Bosquet; Jun Fang; Xiang Deng; Sonja I Berndt; Eugenia E Calle; Heather Spencer Feigelson; Michael J Thun; Carmen Rodriguez; Demetrius Albanes; Jarmo Virtamo; Stephanie Weinstein; Fredrick R Schumacher; Edward Giovannucci; Walter C Willett; Olivier Cussenot; Antoine Valeri; Gerald L Andriole; E David Crawford; Margaret Tucker; Daniela S Gerhard; Joseph F Fraumeni; Robert Hoover; Richard B Hayes; David J Hunter; Stephen J Chanock
Journal:  Nat Genet       Date:  2008-02-10       Impact factor: 38.330

10.  Genome-wide association study identifies novel breast cancer susceptibility loci.

Authors:  Douglas F Easton; Karen A Pooley; Alison M Dunning; Paul D P Pharoah; Deborah Thompson; Dennis G Ballinger; Jeffery P Struewing; Jonathan Morrison; Helen Field; Robert Luben; Nicholas Wareham; Shahana Ahmed; Catherine S Healey; Richard Bowman; Kerstin B Meyer; Christopher A Haiman; Laurence K Kolonel; Brian E Henderson; Loic Le Marchand; Paul Brennan; Suleeporn Sangrajrang; Valerie Gaborieau; Fabrice Odefrey; Chen-Yang Shen; Pei-Ei Wu; Hui-Chun Wang; Diana Eccles; D Gareth Evans; Julian Peto; Olivia Fletcher; Nichola Johnson; Sheila Seal; Michael R Stratton; Nazneen Rahman; Georgia Chenevix-Trench; Stig E Bojesen; Børge G Nordestgaard; Christen K Axelsson; Montserrat Garcia-Closas; Louise Brinton; Stephen Chanock; Jolanta Lissowska; Beata Peplonska; Heli Nevanlinna; Rainer Fagerholm; Hannaleena Eerola; Daehee Kang; Keun-Young Yoo; Dong-Young Noh; Sei-Hyun Ahn; David J Hunter; Susan E Hankinson; David G Cox; Per Hall; Sara Wedren; Jianjun Liu; Yen-Ling Low; Natalia Bogdanova; Peter Schürmann; Thilo Dörk; Rob A E M Tollenaar; Catharina E Jacobi; Peter Devilee; Jan G M Klijn; Alice J Sigurdson; Michele M Doody; Bruce H Alexander; Jinghui Zhang; Angela Cox; Ian W Brock; Gordon MacPherson; Malcolm W R Reed; Fergus J Couch; Ellen L Goode; Janet E Olson; Hanne Meijers-Heijboer; Ans van den Ouweland; André Uitterlinden; Fernando Rivadeneira; Roger L Milne; Gloria Ribas; Anna Gonzalez-Neira; Javier Benitez; John L Hopper; Margaret McCredie; Melissa Southey; Graham G Giles; Chris Schroen; Christina Justenhoven; Hiltrud Brauch; Ute Hamann; Yon-Dschun Ko; Amanda B Spurdle; Jonathan Beesley; Xiaoqing Chen; Arto Mannermaa; Veli-Matti Kosma; Vesa Kataja; Jaana Hartikainen; Nicholas E Day; David R Cox; Bruce A J Ponder
Journal:  Nature       Date:  2007-06-28       Impact factor: 49.962

View more
  51 in total

Review 1.  Complex Trait Prediction from Genome Data: Contrasting EBV in Livestock to PRS in Humans: Genomic Prediction.

Authors:  Naomi R Wray; Kathryn E Kemper; Benjamin J Hayes; Michael E Goddard; Peter M Visscher
Journal:  Genetics       Date:  2019-04       Impact factor: 4.562

Review 2.  Where GWAS and epidemiology meet: opportunities for the simultaneous study of genetic and environmental risk factors in schizophrenia.

Authors:  John J McGrath; Preben Bo Mortensen; Peter M Visscher; Naomi R Wray
Journal:  Schizophr Bull       Date:  2013-08-01       Impact factor: 9.306

Review 3.  Dark matters in AMD genetics: epigenetics and stochasticity.

Authors:  Leonard M Hjelmeland
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-03-01       Impact factor: 4.799

4.  Multi-locus models of genetic risk of disease.

Authors:  Naomi R Wray; Michael E Goddard
Journal:  Genome Med       Date:  2010-02-02       Impact factor: 11.117

5.  From R.A. Fisher's 1918 Paper to GWAS a Century Later.

Authors:  Peter M Visscher; Michael E Goddard
Journal:  Genetics       Date:  2019-04       Impact factor: 4.562

6.  Genetic risk scores and family history as predictors of schizophrenia in Nordic registers.

Authors:  Y Lu; J G Pouget; O A Andreassen; S Djurovic; T Esko; C M Hultman; A Metspalu; L Milani; T Werge; P F Sullivan
Journal:  Psychol Med       Date:  2017-09-25       Impact factor: 7.723

7.  Genetic modifiers and subtypes in schizophrenia: investigations of age at onset, severity, sex and family history.

Authors:  Sarah E Bergen; Colm T O'Dushlaine; Phil H Lee; Ayman H Fanous; Douglas M Ruderfer; Stephan Ripke; Patrick F Sullivan; Jordan W Smoller; Shaun M Purcell; Aiden Corvin
Journal:  Schizophr Res       Date:  2014-02-26       Impact factor: 4.939

8.  Identifying bipolar disorder susceptibility loci in a densely affected pedigree.

Authors:  A L Collins; Y Kim; J P Szatkiewicz; R J Bloom; C E Hilliard; C R Quackenbush; S Meier; F Rivas; F Mayoral; S Cichon; M M Nöthen; M Rietschel; P F Sullivan
Journal:  Mol Psychiatry       Date:  2012-12-18       Impact factor: 15.992

Review 9.  Narrowing the boundaries of the genetic architecture of schizophrenia.

Authors:  Naomi R Wray; Peter M Visscher
Journal:  Schizophr Bull       Date:  2009-12-08       Impact factor: 9.306

10.  The genetic interpretation of area under the ROC curve in genomic profiling.

Authors:  Naomi R Wray; Jian Yang; Michael E Goddard; Peter M Visscher
Journal:  PLoS Genet       Date:  2010-02-26       Impact factor: 5.917

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.