Literature DB >> 19826436

The Allen Brain Atlas: 5 years and beyond.

Allan R Jones1, Caroline C Overly, Susan M Sunkin.   

Abstract

The Allen Brain Atlas, a Web-based, genome-wide atlas of gene expression in the adult mouse brain, was an experiment on a massive scale. The development of the atlas faced a combination of great technical challenges and a non-traditional open research model, and it encountered many hurdles on the path to completion and community adoption. Having overcome these challenges, it is now a fundamental tool for neuroscientists worldwide and has set the stage for the creation of other similar open resources. Nevertheless, there are many untapped opportunities for exploration.

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Year:  2009        PMID： 19826436     DOI： 10.1038/nrn2722

Source DB:  PubMed          Journal:  Nat Rev Neurosci        ISSN： 1471-003X            Impact factor:   34.870


  122 in total

1.  Impaired orthotopic glioma growth and vascularization in transgenic mouse models of Alzheimer's disease.

Authors:  Daniel Paris; Nowel Ganey; Magdalena Banasiak; Vincent Laporte; Nikunj Patel; Myles Mullan; Susan F Murphy; Gi-Taek Yee; Corbin Bachmeier; Christopher Ganey; David Beaulieu-Abdelahad; Venkatarajan S Mathura; Steven Brem; Michael Mullan
Journal:  J Neurosci       Date:  2010-08-25       Impact factor: 6.167

Review 2.  Data publishing and scientific journals: the future of the scientific paper in a world of shared data.

Authors:  Erik De Schutter
Journal:  Neuroinformatics       Date:  2010-10

Review 3.  Single cell transcriptomics of hypothalamic warm sensitive neurons that control core body temperature and fever response Signaling asymmetry and an extension of chemical neuroanatomy.

Authors:  James Eberwine; Tamas Bartfai
Journal:  Pharmacol Ther       Date:  2010-10-21       Impact factor: 12.310

4.  Action and language mechanisms in the brain: data, models and neuroinformatics.

Authors:  Michael A Arbib; James J Bonaiuto; Ina Bornkessel-Schlesewsky; David Kemmerer; Brian MacWhinney; Finn Årup Nielsen; Erhan Oztop
Journal:  Neuroinformatics       Date:  2014-01

Review 5.  Leveraging Online Resources to Prioritize Candidate Genes for Functional Analyses: Using the Fetal Testis as a Test Case.

Authors:  Kathryn S McClelland; Humphrey H-C Yao
Journal:  Sex Dev       Date:  2017-02-15       Impact factor: 1.824

6.  Autism candidate genes via mouse phenomics.

Authors:  Terrence F Meehan; Christopher J Carr; Jeremy J Jay; Carol J Bult; Elissa J Chesler; Judith A Blake
Journal:  J Biomed Inform       Date:  2011-03-21       Impact factor: 6.317

7.  Automated registration of magnetic resonance imaging and optoacoustic tomography data for experimental studies.

Authors:  Wuwei Ren; Hlynur Skulason; Felix Schlegel; Markus Rudin; Jan Klohs; Ruiqing Ni
Journal:  Neurophotonics       Date:  2019-04-03       Impact factor: 3.593

8.  Cerebellar and posterior fossa malformations in patients with autism-associated chromosome 22q13 terminal deletion.

Authors:  Kimberly A Aldinger; Jillene Kogan; Virginia Kimonis; Bridget Fernandez; Denise Horn; Eva Klopocki; Brian Chung; Annick Toutain; Rosanna Weksberg; Kathleen J Millen; A James Barkovich; William B Dobyns
Journal:  Am J Med Genet A       Date:  2012-12-07       Impact factor: 2.802

9.  A study of the role of the FOXP2 and CNTNAP2 genes in persistent developmental stuttering.

Authors:  Tae-Un Han; John Park; Carlos F Domingues; Danilo Moretti-Ferreira; Emily Paris; Eduardo Sainz; Joanne Gutierrez; Dennis Drayna
Journal:  Neurobiol Dis       Date:  2014-05-05       Impact factor: 5.996

10.  Candidate gene prioritization based on spatially mapped gene expression: an application to XLMR.

Authors:  Rosario M Piro; Ivan Molineris; Ugo Ala; Paolo Provero; Ferdinando Di Cunto
Journal:  Bioinformatics       Date:  2010-09-15       Impact factor: 6.937
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