Literature DB >> 19821459

An adaptor domain-mediated autocatalytic interfacial kinase reaction.

Xiaoli Liao1, Jing Su, Milan Mrksich.   

Abstract

This paper describes a model system for studying the autocatalytic phosphorylation of an immobilized substrate by a kinase enzyme. This work uses self-assembled monolayers (SAMs) of alkanethiolates on gold to present the peptide substrate on a planar surface. Treatment of the monolayer with Abl kinase results in phosphorylation of the substrate. The phosphorylated peptide then serves as a ligand for the SH2 adaptor domain of the kinase and thereby directs the kinase activity to nearby peptide substrates. This directed reaction is intramolecular and proceeds with a faster rate than does the initial, intermolecular reaction, making this an autocatalytic process. The kinetic non-linearity gives rise to properties that have no counterpart in the corresponding homogeneous phase reaction: in one example, the rate for phosphorylation of a mixture of two peptides is faster than the sum of the rates for phosphorylation of each peptide when presented alone. This work highlights the use of an adaptor domain in modulating the activity of a kinase enzyme for an immobilized substrate and offers a new approach for studying biochemical reactions in spatially inhomogeneous settings.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19821459      PMCID: PMC2856317          DOI: 10.1002/chem.200901345

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  36 in total

1.  Network motifs in the transcriptional regulation network of Escherichia coli.

Authors:  Shai S Shen-Orr; Ron Milo; Shmoolik Mangan; Uri Alon
Journal:  Nat Genet       Date:  2002-04-22       Impact factor: 38.330

2.  Using mass spectrometry to characterize self-assembled monolayers presenting peptides, proteins, and carbohydrates.

Authors:  Jing Su; Milan Mrksich
Journal:  Angew Chem Int Ed Engl       Date:  2002-12-16       Impact factor: 15.336

Review 3.  Feedback regulation of lymphocyte signalling.

Authors:  Michael Reth; Tilman Brummer
Journal:  Nat Rev Immunol       Date:  2004-04       Impact factor: 53.106

Review 4.  Transcription factors: structural families and principles of DNA recognition.

Authors:  C O Pabo; R T Sauer
Journal:  Annu Rev Biochem       Date:  1992       Impact factor: 23.643

5.  Profiling kinase activities by using a peptide chip and mass spectrometry.

Authors:  Dal-Hee Min; Jing Su; Milan Mrksich
Journal:  Angew Chem Int Ed Engl       Date:  2004-11-12       Impact factor: 15.336

6.  Enhanced affinities and specificities of consolidated ligands for the Src homology (SH) 3 and SH2 domains of Abelson protein-tyrosine kinase.

Authors:  D Cowburn; J Zheng; Q Xu; G Barany
Journal:  J Biol Chem       Date:  1995-11-10       Impact factor: 5.157

7.  Catalytic specificity of protein-tyrosine kinases is critical for selective signalling.

Authors:  Z Songyang; K L Carraway; M J Eck; S C Harrison; R A Feldman; M Mohammadi; J Schlessinger; S R Hubbard; D P Smith; C Eng
Journal:  Nature       Date:  1995-02-09       Impact factor: 49.962

8.  Combining microfluidic networks and peptide arrays for multi-enzyme assays.

Authors:  Jing Su; Michelle R Bringer; Rustem F Ismagilov; Milan Mrksich
Journal:  J Am Chem Soc       Date:  2005-05-25       Impact factor: 15.419

9.  Src homology 2 domain as a specificity determinant in the c-Abl-mediated tyrosine phosphorylation of the RNA polymerase II carboxyl-terminal repeated domain.

Authors:  J Duyster; R Baskaran; J Y Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-28       Impact factor: 11.205

10.  Membrane-dependent signal integration by the Ras activator Son of sevenless.

Authors:  Jodi Gureasko; William J Galush; Sean Boykevisch; Holger Sondermann; Dafna Bar-Sagi; Jay T Groves; John Kuriyan
Journal:  Nat Struct Mol Biol       Date:  2008-05-04       Impact factor: 15.369

View more
  7 in total

Review 1.  ABL tyrosine kinases: evolution of function, regulation, and specificity.

Authors:  John Colicelli
Journal:  Sci Signal       Date:  2010-09-14       Impact factor: 8.192

2.  A spatially propagating biochemical reaction.

Authors:  Xiaoli Liao; Rafe T Petty; Milan Mrksich
Journal:  Angew Chem Int Ed Engl       Date:  2010-12-22       Impact factor: 15.336

3.  Fluorescence lifetime imaging of biosensor peptide phosphorylation in single live cells.

Authors:  Nur P Damayanti; Laurie L Parker; Joseph M K Irudayaraj
Journal:  Angew Chem Int Ed Engl       Date:  2013-02-28       Impact factor: 15.336

4.  Rate enhancement of an interfacial biochemical reaction through localization of substrate and enzyme by an adaptor domain.

Authors:  Jing Li; Satish Nayak; Milan Mrksich
Journal:  J Phys Chem B       Date:  2010-11-03       Impact factor: 2.991

5.  Exploring the Ligand Preferences of the PHD1 Domain of Histone Demethylase KDM5A Reveals Tolerance for Modifications of the Q5 Residue of Histone 3.

Authors:  Sarah E Anderson; James E Longbotham; Patrick T O'Kane; Fatima S Ugur; Danica Galonić Fujimori; Milan Mrksich
Journal:  ACS Chem Biol       Date:  2020-12-14       Impact factor: 5.100

6.  Steady-state of an enzymatic reaction is dependent on the density of reactant.

Authors:  Shuheng Li; Xiaoli Liao; Milan Mrksich
Journal:  Langmuir       Date:  2012-12-13       Impact factor: 3.882

7.  Activation State-Dependent Substrate Gating in Ca2+/Calmodulin-Dependent Protein Kinase II.

Authors:  D E Johnson; A Hudmon
Journal:  Neural Plast       Date:  2017-12-17       Impact factor: 3.599

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.