Literature DB >> 19820340

An insight into the biological functions of family X-DNA polymerase in DNA replication and repair of plant genome.

Sujit Roy1, Sanjay Kumar Singh, Swarup Roy Choudhury, Dibyendu N Sengupta.   

Abstract

Recently we have reported the characterization of a novel single subunit 62-kDa polypeptide with ddNTP-sensitive DNA polymerase activity from the developing seeds of mungbean (Vigna radiata). The protein showed higher expression and activity level during nuclear endoreduplication stages of mungbean seeds and similarity with mammalian DNA polymerase beta in many physicochemical properties. The enzyme was found to specifically interact with PCNA (proliferating cell nuclear antigen), and expressed in both meristematic and meiotic tissues. Functional assays have demonstrated binding of the enzyme to normal and mismatched DNA substrates and with fidelity DNA synthesis in moderately processive mode, suggesting probable involvement of the enzyme in both replication and recombination. Here we have discussed the position of mungbean DNA polymerase as a homologue of DNA Pol lambda, one of the newly identified member of family-X DNA polymerase in plants and illustrated the functional relevance of this enzyme in maintaining the coordination between DNA replication and repair in plant genome.

Entities:  

Year:  2009        PMID: 19820340      PMCID: PMC2710574          DOI: 10.4161/psb.4.7.9077

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  15 in total

1.  A biochemically defined system for mammalian nonhomologous DNA end joining.

Authors:  Yunmei Ma; Haihui Lu; Brigette Tippin; Myron F Goodman; Noriko Shimazaki; Osamu Koiwai; Chih-Lin Hsieh; Klaus Schwarz; Michael R Lieber
Journal:  Mol Cell       Date:  2004-12-03       Impact factor: 17.970

2.  DNA polymerase lambda directly binds to proliferating cell nuclear antigen through its confined C-terminal region.

Authors:  Noriko Shimazaki; Takaya Yazaki; Takashi Kubota; Asami Sato; Ayako Nakamura; Shunsuke Kurei; Shingo Toji; Katsuyuki Tamai; Osamu Koiwai
Journal:  Genes Cells       Date:  2005-07       Impact factor: 1.891

3.  Sequential, structural, and phylogenetic study of BRCT module in plants.

Authors:  Sanjay Kumar Singh; Swarup Roy Choudhury; Sujit Roy; Dibyendu N Sengupta
Journal:  J Biomol Struct Dyn       Date:  2008-10

4.  Compilation, alignment, and phylogenetic relationships of DNA polymerases.

Authors:  D K Braithwaite; J Ito
Journal:  Nucleic Acids Res       Date:  1993-02-25       Impact factor: 16.971

5.  DNA polymerase lambda (Pol lambda), a novel eukaryotic DNA polymerase with a potential role in meiosis.

Authors:  M García-Díaz; O Domínguez; L A López-Fernández; L T de Lera; M L Saníger; J F Ruiz; M Párraga; M J García-Ortiz; T Kirchhoff; J del Mazo; A Bernad; L Blanco
Journal:  J Mol Biol       Date:  2000-08-25       Impact factor: 5.469

6.  Analysis of processivity of mungbean dideoxynucleotide-sensitive DNA polymerase and detection of the activity and expression of the enzyme in the meristematic and meiotic tissues and following DNA damaging agent.

Authors:  Sujit Roy; Swarup Roy Choudhury; Dibyendu N Sengupta
Journal:  Arch Biochem Biophys       Date:  2008-04-18       Impact factor: 4.013

7.  Plant DNA polymerase lambda, a DNA repair enzyme that functions in plant meristematic and meiotic tissues.

Authors:  Yukinobu Uchiyama; Seisuke Kimura; Taichi Yamamoto; Toyotaka Ishibashi; Kengo Sakaguchi
Journal:  Eur J Biochem       Date:  2004-07

8.  Mammalian abasic site base excision repair. Identification of the reaction sequence and rate-determining steps.

Authors:  D K Srivastava; B J Berg; R Prasad; J T Molina; W A Beard; A E Tomkinson; S H Wilson
Journal:  J Biol Chem       Date:  1998-08-14       Impact factor: 5.157

9.  Tobacco proliferating cell nuclear antigen binds directly and stimulates both activity and processivity of ddNTP-sensitive mungbean DNA polymerase.

Authors:  Sujit Roy; Swarup Roy Choudhury; Sunil K Mukherjee; Dibyendu N Sengupta
Journal:  Arch Biochem Biophys       Date:  2007-09-19       Impact factor: 4.013

10.  Excision of deoxyribose phosphate residues by DNA polymerase beta during DNA repair.

Authors:  Y Matsumoto; K Kim
Journal:  Science       Date:  1995-08-04       Impact factor: 47.728

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  6 in total

1.  The interplay of DNA polymerase λ in diverse DNA damage repair pathways in higher plant genome in response to environmental and genotoxic stress factors.

Authors:  Sujit Roy; Swarup Roy Choudhury; Kalipada Das
Journal:  Plant Signal Behav       Date:  2012-12-06

2.  Functional analysis of light-regulated promoter region of AtPolλ gene.

Authors:  Sujit Roy; Swarup Roy Choudhury; Sanjay Kumar Singh; Kali Pada Das
Journal:  Planta       Date:  2011-09-25       Impact factor: 4.116

3.  Involvement of AtPolλ in the repair of high salt- and DNA cross-linking agent-induced double strand breaks in Arabidopsis.

Authors:  Sujit Roy; Swarup Roy Choudhury; Dibyendu N Sengupta; Kali Pada Das
Journal:  Plant Physiol       Date:  2013-05-09       Impact factor: 8.340

Review 4.  DNA damage and repair in plants under ultraviolet and ionizing radiations.

Authors:  Sarvajeet S Gill; Naser A Anjum; Ritu Gill; Manoranjan Jha; Narendra Tuteja
Journal:  ScientificWorldJournal       Date:  2015-02-02

Review 5.  Maintenance of genome stability in plants: repairing DNA double strand breaks and chromatin structure stability.

Authors:  Sujit Roy
Journal:  Front Plant Sci       Date:  2014-09-23       Impact factor: 5.753

6.  General control non-repressible 20 (GCN20) functions in root growth by modulating DNA damage repair in Arabidopsis.

Authors:  Tong-Tong Han; Wen-Cheng Liu; Ying-Tang Lu
Journal:  BMC Plant Biol       Date:  2018-11-12       Impact factor: 4.215

  6 in total

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